Zingiber officinale (ginger): 122001967
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Entry
122001967 CDS
T08725
Name
(RefSeq) probable transcription factor RL9
KO
K28174
GARP family transcription factor, KAN subfamily
Organism
zof
Zingiber officinale (ginger)
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
zof03000
]
122001967
Transcription factors [BR:
zof03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters Myb, Myb-like factors
122001967
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Myb_DNA-binding
Motif
Other DBs
NCBI-GeneID:
122001967
NCBI-ProteinID:
XP_042412894
LinkDB
All DBs
Position
7A:108311140..108316622
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AA seq
426 aa
AA seq
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MEMSMEAAAMTTSSPDLSLHISPPNINLADSICASSGESSHCFREDDDDAARTKLCLSYP
STAATVDNTWWPQPPRLLENYSLMPPLDRCHITHRAIGSGSFDGLTPIKGIPVYNKNSST
GAGVGTPLPFLSVDPKLHAVSASAFSSHWPSSSSSSNFDAMPSPSFLGPIPNGATSPYHR
MISHPQASRLNGAAFSPELLIKNHNAHHHHQLFHHHHYSNYGMIRPFEPSSHANMLMRSR
FLPKLPAKRTMRAPRMRWTSTLHARFVHAVELLGGHERATPKSVLELMDVKDLTLAHVKS
HLQMYRTLKTTDKPAASSGQSDGSGEEDFSPASNADLNIGRLMEQRVTSDAGAKPSTTYA
LDFPSAIANTTTKWTNSSSRSGWTQPSCDLDEDNHSHNRMSTSEEVKNPSLEFTLGRPDW
NETEHV
NT seq
1281 nt
NT seq
+upstream
nt +downstream
nt
atggaaatgtcaatggaagccgccgccatgacgacgtcgtcgcccgacctctccctgcac
atcagccctccaaacatcaatcttgcggattcaatctgtgcgagctccggcgagtcctcc
cactgcttccgagaagacgacgatgatgccgctcgcactaagctctgtctttcttatcct
tccactgcagcgacggtcgacaacacgtggtggccgcagccgccgagattgctggagaac
tactcgctgatgccgccgctagatcgctgccacattactcaccgtgcgatcgggagcggc
tccttcgacggcctcacgccaataaaaggtatcccggtctacaacaaaaatagcagtacc
ggtgccggcgtcggcacgccgctccctttcctctctgttgatcccaagcttcacgccgtt
tctgcctccgccttctcctctcactggccctcttcttcctcctcgtccaatttcgacgcg
atgccgtctccttcattcctcggccccatccccaacggcgccacgtctccgtaccaccgc
atgatctctcacccgcaggcgtcacggctcaacggcgcagccttttccccagagctgttg
atcaaaaaccacaacgcgcaccatcaccatcagctcttccaccatcaccactacagcaat
tacggcatgatcaggcccttcgaaccttcctcccacgccaacatgttgatgcggtcgcgg
ttcctccccaagcttccggcgaagcgcaccatgcgagcgccgcggatgcggtggaccagc
accctccacgcccgcttcgtccacgccgtcgaacttctcggcggccacgaaagggcaact
ccgaaatcagtactcgagctcatggatgtcaaagacctcactttagcacatgtcaagagc
catttgcagatgtatagaactctgaagaccactgacaagcctgctgcttcctcaggccaa
tcagatggctcaggcgaagaggacttctctcctgcaagcaatgctgatctcaacatcgga
cggctgatggagcagagagtaacctcagacgccggagctaaaccaagcactacttatgcc
ttggacttcccttctgccattgctaacaccaccactaaatggactaactcatcaagccga
agtggatggacgcaaccaagctgtgatctagacgaagataatcattctcataatcgaatg
agcacctccgaagaagtcaaaaaccctagcttggagttcaccttaggaagaccagattgg
aatgagactgagcatgtttga
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