Zingiber officinale (ginger): 122002060
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Entry
122002060 CDS
T08725
Name
(RefSeq) single myb histone 6-like isoform X1
KO
K09422
transcription factor MYB, plant
Organism
zof
Zingiber officinale (ginger)
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
zof03000
]
122002060
Transcription factors [BR:
zof03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters Myb, Myb-factors
122002060
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Linker_histone
Myb_DNA-binding
HTH_Hrp3
Myb_DNA-bind_6
CHDCT2
Motif
Other DBs
NCBI-GeneID:
122002060
NCBI-ProteinID:
XP_042413030
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Position
7A:complement(113049464..113056492)
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AA seq
329 aa
AA seq
DB search
MGAPKQKWTAEEEAALKAGVVKHGAGKWRTILKDPEFSGVLCSRSNVDLKDKWRNLSVTA
NGWGSREKARALKRSQQTPKHDGSSKAARTMYEDDDDELMESKSLATNENLHIAGQKRSF
SRTDNLILEAITNLKEPTGSNKTAIATYIEDQYWPPPDFAELLSDKLKELTASGRLIRVK
RKYRMAPTSAFPSRKTSKLLIPEGRQSEPSRTIRDDLKPFSRFQVDAELGRMQSMTAQQA
AAIAAQAVAEAEAAMAEAEAAAREAEAAEANAEVAQAFAEAVMLTMKNKNKSNLVILSTA
SILFSFNSTCLALVRTIEGHQLIANLIDH
NT seq
990 nt
NT seq
+upstream
nt +downstream
nt
atgggtgctcccaagcaaaagtggacagcagaagaggaggcagctctcaaagctggagtt
gtgaagcatggtgctggaaaatggcgcacaatattgaaagatccagaattcagtggcgta
ttatgttcgaggtcaaatgtggacctaaaggataagtggcgtaacttgagtgtgactgca
aatggttggggatcccgagagaaggctagagcattgaaaaggagccaacaaacacccaaa
catgatggtagctcaaaggctgccaggacaatgtatgaagatgatgatgatgaactaatg
gaaagcaagtctcttgctactaatgaaaatcttcatattgctggtcaaaagagatctttc
tccaggacagacaatctgatactggaagccataacaaacctgaaggagcccactggatct
aacaagacagctattgccacatacatagaggaccaatattggccaccaccagattttgca
gaactgttatcagataagctgaaagagttgactgctagtgggagattgattagggtgaaa
cgcaagtataggatggcaccaacctcagctttccctagcagaaaaacatctaaacttctg
attccagagggtagacaaagtgagccttcaagaacaatcagggatgatctaaaacctttc
tcaagatttcaagttgatgctgaattgggacgaatgcaaagcatgacagcgcagcaggct
gcagccattgctgctcaagctgttgctgaggcagaagcagccatggcagaggctgaagca
gcagctagagaagcagaagctgcagaggctaatgccgaagtagctcaggctttcgctgag
gcagtgatgttaactatgaagaataaaaacaagtctaacctggtaatattatcgactgca
agcatcttattctcttttaattcaacatgtcttgcattagttagaacaattgaaggccac
caattaattgccaatttgattgatcattag
DBGET
integrated database retrieval system
