KEGG   Zingiber officinale (ginger): 122002106
Entry
122002106         CDS       T08725                                 
Name
(RefSeq) WD repeat-containing protein 48-like isoform X1
  KO
K15361  WD repeat-containing protein 48
Organism
zof  Zingiber officinale (ginger)
Pathway
zof03460  Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:zof00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03460 Fanconi anemia pathway
    122002106
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:zof03400]
    122002106
DNA repair and recombination proteins [BR:zof03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   FA (Fanconi anemia) pathway
    Other FA pathway factors
     122002106
SSDB
Motif
Pfam: WD40 WD40_Prp19 DUF3337 WD40_WDHD1_1st WD40_CDC20-Fz WDR55 Beta-prop_TEP1_2nd EIF3I Beta-prop_EML Beta-prop_EML_2 Beta-prop_WDR75_1st Beta-prop_CAF1B_HIR1 Beta-prop_SCAP NBCH_WD40 WD40_MABP1-WDR62_2nd Beta-prop_SPT8 Beta-prop_IFT122_1st Beta-prop_TEP1_C Beta-prop_WDR90_POC16_2nd Beta-prop_EIPR1 Beta-prop_WDR75_2nd Beta-prop_DCAF4 WD40_MABP1-WDR62_1st ANAPC4_WD40 Beta-prop_DCAF12 Beta-prop_IP5PC_F RAWUL WD40_RFWD3 Beta-prop_Nup120_160
Other DBs
NCBI-GeneID: 122002106
NCBI-ProteinID: XP_042413098
LinkDB
Position
7A:114855692..114863527
AA seq 759 aa
MHRVGSAGNTSNSSRPRKEKRLTYVLNDADSTKHCAGINCLAVLKSTTPCDYLFTGSRDG
TLKRWALSKNDVTYSATFESHVDWVNDAVMAGSNLVSCSSDTTLKIWNPLSDGVCTRTLR
QHSDYVICLAAAEQNGNIVASAGLGGEVFIWDIDAALLPVAKSVDSKEDEHSNGNAGPPM
SSLRGINVGNDIAFHNNQSSGYCPIAAKGHKESVYALAMNDSGTLLVSGGTEKVIRVWDS
RSGSKVLKLRGHTDNIRALLLDSTGRFCLSGSSDSMIRLWDLGQQRCVHSYAVHTDSVWA
LASNPAFTHVYSGGRDQSLYLTDLSTRESLLLYTKEEHPILQMVLQDDSIWIATTDSSVH
RLPAEGQNPQKVLERGGSFLAGNLSFTRARASLEGSAPVPVYKEPSFTISGIPGIVKYEI
LNNRRHVLTKDTVGSVKLWEITKGVVIEDYGKQVSFDEKKEELFEMVSIPAWFTMDTRLG
SLSVHLDTPQCFSAEMYAVDLNMVGAPEDLKINLAQETLRGLLVHWMAKRRHRSGSHTSS
NGDVASTHDIVRNHPHSKIEVDDGSDNSNFSALPSFEFSTVSPPSIVTEGSHGGPWRKKI
TDLDGTEDEKDLPWWSMECVLNSRLPARENTKCSFHLQACEGSNVQIITQGKLSAPRILR
INKVINYVLEKMVLDKPLDGGSSDGSSGLGLSTGQSQLSSLGDVSLRSGMKAWQKIKPSI
EILCNNQVLLPEMSLATVRAYIWKKPEDLILNYRVVQNK
NT seq 2280 nt   +upstreamnt  +downstreamnt
atgcaccgtgtgggcagtgcaggtaacacctccaattcatcacgtcctcggaaggagaaa
cgcttgacatatgtactgaatgatgcagatagcacaaagcattgtgcaggtattaattgt
ttggctgtcctaaaatccacaactccttgtgattatcttttcacggggagcagagatggg
acattgaaaagatgggctttaagcaaaaatgatgttacctattcggctacatttgagtcc
catgttgattgggtcaatgatgcagttatggctggtagcaaccttgtctcatgttcttca
gacactaccctgaagatatggaaccccttgtctgatggtgtttgcacaagaactcttcgt
caacattctgactatgtcatttgtcttgctgctgctgagcaaaatggcaatatagttgcc
tctgcggggcttggtggggaggttttcatttgggacattgatgcagctctccttccagtt
gcaaaatctgttgattcaaaagaagatgaacattctaatgggaatgcgggacctccaatg
tcaagcctacggggtattaatgtgggaaacgacatagcttttcataacaatcagtctagt
ggatattgtccaattgctgccaaaggccataaggagtcagtttatgccttagcaatgaat
gatagtgggaccttgcttgtttctggtggaactgagaaggttatacgggtttgggactca
agatctggttcaaaagttttgaagcttagagggcatactgacaacatcagggctttgctt
ctcgattccacaggaaggttctgcctatcagggtcatctgattcaatgatccgtctatgg
gatcttggtcagcaacgatgcgtgcattcttatgctgtccataccgattctgtatgggct
ctcgccagtaatccagcattcacgcatgtttatagtggtgggagagaccaatctttgtac
ctgacagacttgtctaccagagaaagccttttgctttacacaaaagaagaacaccctatt
ttacagatggtgttacaagatgatagtatatggattgcgactacagattcatctgtacat
aggttgccagctgaaggacagaatccacaaaaagttcttgaaagaggtggttctttttta
gcaggaaatttgtctttcacaagggcaagagcttctttagaaggatcagcccctgtacct
gtatacaaagaaccatctttcaccatttctggaatcccaggaattgtaaaatatgaaatc
ttgaataacagaagacatgtgttgaccaaggatacggtaggttctgttaaattgtgggag
attaccaagggtgttgtgatcgaggactatggcaagcaggtgtcttttgacgaaaagaag
gaagagctatttgaaatggtgagtatacctgcatggtttacaatggatacgcgacttgga
agtttgtctgtccatttggatactcctcaatgcttttctgctgagatgtatgccgtggac
ttgaatatggtaggagcaccagaggatctcaagataaacctagctcaagagacacttcgt
ggtttgttggtccactggatggctaaaagaaggcatagatctgggtcacacacttcatca
aatggagatgttgcatctacacatgatattgtcagaaatcatccacactcgaaaattgag
gtggatgatggttcagacaacagcaatttctctgccctcccttcttttgaattttcaaca
gtttcacctccatcgatagttacagagggttcacatggaggtccttggagaaagaagatc
acggatttagatggaacagaagatgagaaggatcttccttggtggagtatggaatgtgtt
ttaaatagccgattacctgcaagagaaaacacaaaatgtagctttcatttgcaagcttgt
gaaggttcaaatgtgcaaataataacacaaggcaaattgagtgcgcctcggatattgagg
attaacaaagtaataaactatgtcttggaaaagatggttcttgacaaaccattggatggt
ggaagctccgatgggtcatctggtttgggattgagcacaggacagtctcaactttcttca
ctaggagatgtctcactacgatcagggatgaaggcctggcaaaagataaagccaagcatc
gaaatcttatgcaacaaccaggtgctcttaccagaaatgagtttggccacagttcgagca
tatatatggaagaagccagaagacttgatcttgaactacagagtggtgcagaacaaatag

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