KEGG   Zingiber officinale (ginger): 122002140
Entry
122002140         CDS       T08725                                 
Name
(RefSeq) serine hydroxymethyltransferase, mitochondrial isoform X1
  KO
K00600  glycine hydroxymethyltransferase [EC:2.1.2.1]
Organism
zof  Zingiber officinale (ginger)
Pathway
zof00260  Glycine, serine and threonine metabolism
zof00460  Cyanoamino acid metabolism
zof00630  Glyoxylate and dicarboxylate metabolism
zof00670  One carbon pool by folate
zof01100  Metabolic pathways
zof01110  Biosynthesis of secondary metabolites
zof01200  Carbon metabolism
zof01230  Biosynthesis of amino acids
zof01240  Biosynthesis of cofactors
zof04981  Folate transport and metabolism
Module
zof_M00532  Photorespiration
Brite
KEGG Orthology (KO) [BR:zof00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00630 Glyoxylate and dicarboxylate metabolism
    122002140
  09105 Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    122002140
  09106 Metabolism of other amino acids
   00460 Cyanoamino acid metabolism
    122002140
  09108 Metabolism of cofactors and vitamins
   00670 One carbon pool by folate
    122002140
 09150 Organismal Systems
  09154 Digestive system
   04981 Folate transport and metabolism
    122002140
Enzymes [BR:zof01000]
 2. Transferases
  2.1  Transferring one-carbon groups
   2.1.2  Hydroxymethyl-, formyl- and related transferases
    2.1.2.1  glycine hydroxymethyltransferase
     122002140
SSDB
Motif
Pfam: SHMT Aminotran_1_2 Beta_elim_lyase
Other DBs
NCBI-GeneID: 122002140
NCBI-ProteinID: XP_042413144
LinkDB
Position
7A:116166871..116173556
AA seq 517 aa
MAMASALRRLSSSSSKSQPFLWNSLYYMSSLPSEAVYEKEKSRVTWPKQLNAPLAVVDPE
IADIIELEKARQWKGLELIPSENFTSVSVMQAVGSIMTNKYSEGYPGARYYGGNEYIDMA
ETLCQKRALEAFHLDPEKWGVNVQSLSGSPSNFQVYTALLKPHERIMALDLPHGGHLSHG
YQTDTKKISAVSIFFETMPYRLDESTGYIDYDQLEKSATLFRPKLIVAGASAYSRLYDYA
RIRKVCDKHKAILLADMAHISGLVAGGVIPSPFEYADIVTTTTHKSLRGPRGAMIFFRKG
VKEINKQGKEVLYDFEDKINQAVFPGLQGGPHNHTISGLAVALKQATTPEYKAYQEQVLR
NCARFAQTLVAKGYELVSGGTENHLVLVNLKNKGIDGSRVEKVLELVHIAANKNTVPGDV
SAMVPGGIRMGTPALTSRGFVEEDFAKVADFFDTAVNLSLKIKTETKAGTKLKDFLTTIQ
TDANIQSEIKKLRQDVEEYAKQFPTIGFEKETMKYKV
NT seq 1554 nt   +upstreamnt  +downstreamnt
atggcaatggcgtcggcgctccgtagactctcttcctcctcctcgaaatcgcagcctttc
ctgtggaactctctgtattacatgtcctccctaccgagcgaggccgtctacgagaaggag
aaatctcgcgtcacgtggccgaaacagctgaacgctccgttagcggtcgtcgatccggag
attgcggatatcatcgagctcgagaaggctcgacaatggaagggactcgagctcattcct
tcggagaatttcacttcggtgtcggtgatgcaagcagtagggtctatcatgaccaacaaa
tacagtgaaggttatcctggtgcaagatactatggtggcaatgaatatattgacatggca
gaaacattgtgtcagaaacgtgcgctagaagcattccatctagatcctgaaaaatgggga
gtgaatgtgcagtctctatcaggatcaccttctaattttcaagtatatacggcactctta
aaaccgcatgaaagaataatggctcttgatctgcctcatggtggacatctttctcatggc
taccagactgataccaagaagatctctgcagtgtccatattctttgaaacaatgccttac
aggcttgatgagagtactgggtatattgattacgatcagctggagaaaagtgctacactc
ttcaggccaaaattaatagtggctggtgctagtgcctattctcgcctctatgactatgct
cgtattaggaaggtatgtgacaaacacaaagctatccttctagcagatatggctcatata
agtggacttgttgctggtggtgtcattccatctccattcgagtatgcagatatcgtcaca
actacaactcataagtcactccgtggaccacgaggggccatgatattcttcaggaaagga
gtgaaggagatcaacaaacaagggaaagaggttttgtacgactttgaagacaagatcaat
caagcagtcttccctggactccaaggtggcccacacaaccacaccatttctggtttagct
gttgctctcaaacaggccaccactcctgagtacaaagcctatcaagagcaagtactccgc
aactgtgcaagatttgctcagactttggttgcaaaaggctatgagcttgtttcaggtgga
acagagaaccatttagtattggtgaatcttaagaacaagggaattgatgggtctagagtt
gaaaaggtgcttgaattagttcacattgcagctaacaaaaacactgtacctggtgatgtt
tctgccatggttcctggaggcatcaggatgggaaccccagcccttacatcgagaggattt
gttgaagaagactttgctaaagttgctgacttctttgacactgctgtgaatttgtcattg
aagatcaagactgaaacaaaagctggaacaaagctgaaggattttctaaccaccattcag
acagatgctaatattcaatctgagatcaagaagctccgccaggacgtggaagaatatgca
aaacagttcccaactattggatttgagaaggaaactatgaaatacaaagtctga

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