Zingiber officinale (ginger): 122002235
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Entry
122002235 CDS
T08725
Name
(RefSeq) GTPase HflX-like
KO
K03665
GTPase
Organism
zof
Zingiber officinale (ginger)
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
zof03009
]
122002235
Ribosome biogenesis [BR:
zof03009
]
Prokaryotic type
GTPases
122002235
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP-bdg_N
GTP-bdg_M
MMR_HSR1
Dynamin_N
RsgA_GTPase
HflX_C
Arf
FeoB_N
cobW
MMR_HSR1_Xtn
ABC_tran
AAA_33
Nup54_57_C
Roc
Trans_reg_C
Motif
Other DBs
NCBI-GeneID:
122002235
NCBI-ProteinID:
XP_042413272
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Position
7A:119731055..119739174
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AA seq
558 aa
AA seq
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MSSCCSCIVPHRAATASASPSIASSPRRSLHHQSHYPFRRRVPFVRLSSTLWRCRTRPIG
VLKEANEVDANVSEGDPSPEGGFREDATDGLVANGVAGEASEGSLDLVIRDAVRSRRKAD
EDEQEYDRYTMRNGREVFQEKAYLVGVECKGSEANIFSIEESLKELAQLADTAGLWVVDS
TYQKLANPNPRTYIGSGKVAEIKSAIHALDVETVIFDDELSAGQLRNLEKALGGDVRVCD
RTALILDIFNQRAATHEAALQVSLAQMEYQLPRLTKMWSHLERQAGGKVKGMGEKQIEVD
KRILRTQISALRKELESVRQHRKQYRNRRLSVPVPVVSLVGYTNAGKSTLLNRLTGADVL
AEDQLFATLDPTTRRVQMRNGKEFLLTDTVGFIQKLPTMLVAAFRATLEEISESSLIVHV
VDISHPLANQQIDAVNKVLQELDVALIPKLIVWNKIDKTSGPDTLKSEAEKIGAVCISAI
NGDGLEQFCSAVQAKLKDSLVPVEALIPYEKGELLNSIHQVGLVERTEYKENGTLVIAHV
PLPLARLLAPMRQLTAAQ
NT seq
1677 nt
NT seq
+upstream
nt +downstream
nt
atgagctcctgctgctcctgtatcgtccctcaccgcgccgctaccgcctccgcctcccct
tcgatcgcctcatccccacgacgatcgcttcaccaccagagccactatccctttcggcgc
cgtgtgcctttcgttcgcctctcgtcgacgctctggagatgccggacccgcccgatcgga
gtcctcaaggaagccaacgaagtggacgctaacgtttctgagggagatccatctccagag
gggggatttcgagaagatgctaccgatgggctcgtcgccaacggcgttgcgggggaggcg
agcgagggcagtttggatttggttattagggatgccgtgcggagcaggagaaaggccgac
gaggatgaacaagagtacgataggtacactatgcgcaacggaagggaggtatttcaagag
aaagcctaccttgttggtgttgaatgtaaaggttctgaagcaaacattttcagtatcgag
gagtcacttaaagagcttgcacaattagctgatactgctggactgtgggttgttgactct
acctatcaaaagcttgccaatcccaatccgaggacttatattggctctggaaaggttgct
gaaatcaagagtgcaattcatgcactggatgttgaaactgtaatatttgatgatgagttg
tcagcaggacaactccgcaacttggagaaagcgcttggtggagatgttcgtgtatgtgat
cgaactgctctgattcttgatatctttaatcaaagggctgctactcatgaagcagctttg
caggtttctttagcacagatggaataccaacttcccaggttaacaaaaatgtggtctcac
cttgaacgtcaggctggaggcaaggttaagggaatgggagagaaacaaattgaagtggac
aagcgtatcttacgcacacaaattagtgcattgagaaaagaattagaatctgtacggcaa
catcgaaagcaatatcgtaatcggcgtctatcagtacctgttcctgttgtgtccctggtt
ggctatacaaatgctggcaaaagtacgctcttgaatcgcctgactggtgctgatgtcctt
gctgaagatcagctctttgcgacactggatccaactaccagaagggtgcagatgagaaat
ggaaaagagttccttttgactgatacagtaggtttcattcagaagctgcctacgatgttg
gtagctgcatttagagcaacactagaggaaatatccgagtcatcccttatagttcatgtt
gtggacatcagccatcccctagctaatcagcagattgatgccgttaataaagtacttcaa
gaactggatgtggccctaataccaaagctaattgtgtggaataagatcgacaagaccagt
ggtcctgacacattaaaatcagaagcagaaaaaataggtgctgtatgcatatcagcaatt
aatggtgatggattggagcaattctgcagtgcggttcaagcaaaactgaaggactcattg
gttcctgtggaagctttaattccttacgaaaaaggcgagctccttaactcgatacatcag
gttggactggttgagagaactgaatacaaggagaatgggaccttggtgatagcacatgtt
cctcttccacttgcaaggctactagctccaatgaggcaactaactgcagcacaatga
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