KEGG   Zingiber officinale (ginger): 122002235
Entry
122002235         CDS       T08725                                 
Name
(RefSeq) GTPase HflX-like
  KO
K03665  GTPase
Organism
zof  Zingiber officinale (ginger)
Brite
KEGG Orthology (KO) [BR:zof00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:zof03009]
    122002235
Ribosome biogenesis [BR:zof03009]
 Prokaryotic type
  GTPases
   122002235
SSDB
Motif
Pfam: GTP-bdg_N GTP-bdg_M MMR_HSR1 Dynamin_N RsgA_GTPase HflX_C Arf FeoB_N cobW MMR_HSR1_Xtn ABC_tran AAA_33 Nup54_57_C Roc Trans_reg_C
Other DBs
NCBI-GeneID: 122002235
NCBI-ProteinID: XP_042413272
LinkDB
Position
7A:119731055..119739174
AA seq 558 aa
MSSCCSCIVPHRAATASASPSIASSPRRSLHHQSHYPFRRRVPFVRLSSTLWRCRTRPIG
VLKEANEVDANVSEGDPSPEGGFREDATDGLVANGVAGEASEGSLDLVIRDAVRSRRKAD
EDEQEYDRYTMRNGREVFQEKAYLVGVECKGSEANIFSIEESLKELAQLADTAGLWVVDS
TYQKLANPNPRTYIGSGKVAEIKSAIHALDVETVIFDDELSAGQLRNLEKALGGDVRVCD
RTALILDIFNQRAATHEAALQVSLAQMEYQLPRLTKMWSHLERQAGGKVKGMGEKQIEVD
KRILRTQISALRKELESVRQHRKQYRNRRLSVPVPVVSLVGYTNAGKSTLLNRLTGADVL
AEDQLFATLDPTTRRVQMRNGKEFLLTDTVGFIQKLPTMLVAAFRATLEEISESSLIVHV
VDISHPLANQQIDAVNKVLQELDVALIPKLIVWNKIDKTSGPDTLKSEAEKIGAVCISAI
NGDGLEQFCSAVQAKLKDSLVPVEALIPYEKGELLNSIHQVGLVERTEYKENGTLVIAHV
PLPLARLLAPMRQLTAAQ
NT seq 1677 nt   +upstreamnt  +downstreamnt
atgagctcctgctgctcctgtatcgtccctcaccgcgccgctaccgcctccgcctcccct
tcgatcgcctcatccccacgacgatcgcttcaccaccagagccactatccctttcggcgc
cgtgtgcctttcgttcgcctctcgtcgacgctctggagatgccggacccgcccgatcgga
gtcctcaaggaagccaacgaagtggacgctaacgtttctgagggagatccatctccagag
gggggatttcgagaagatgctaccgatgggctcgtcgccaacggcgttgcgggggaggcg
agcgagggcagtttggatttggttattagggatgccgtgcggagcaggagaaaggccgac
gaggatgaacaagagtacgataggtacactatgcgcaacggaagggaggtatttcaagag
aaagcctaccttgttggtgttgaatgtaaaggttctgaagcaaacattttcagtatcgag
gagtcacttaaagagcttgcacaattagctgatactgctggactgtgggttgttgactct
acctatcaaaagcttgccaatcccaatccgaggacttatattggctctggaaaggttgct
gaaatcaagagtgcaattcatgcactggatgttgaaactgtaatatttgatgatgagttg
tcagcaggacaactccgcaacttggagaaagcgcttggtggagatgttcgtgtatgtgat
cgaactgctctgattcttgatatctttaatcaaagggctgctactcatgaagcagctttg
caggtttctttagcacagatggaataccaacttcccaggttaacaaaaatgtggtctcac
cttgaacgtcaggctggaggcaaggttaagggaatgggagagaaacaaattgaagtggac
aagcgtatcttacgcacacaaattagtgcattgagaaaagaattagaatctgtacggcaa
catcgaaagcaatatcgtaatcggcgtctatcagtacctgttcctgttgtgtccctggtt
ggctatacaaatgctggcaaaagtacgctcttgaatcgcctgactggtgctgatgtcctt
gctgaagatcagctctttgcgacactggatccaactaccagaagggtgcagatgagaaat
ggaaaagagttccttttgactgatacagtaggtttcattcagaagctgcctacgatgttg
gtagctgcatttagagcaacactagaggaaatatccgagtcatcccttatagttcatgtt
gtggacatcagccatcccctagctaatcagcagattgatgccgttaataaagtacttcaa
gaactggatgtggccctaataccaaagctaattgtgtggaataagatcgacaagaccagt
ggtcctgacacattaaaatcagaagcagaaaaaataggtgctgtatgcatatcagcaatt
aatggtgatggattggagcaattctgcagtgcggttcaagcaaaactgaaggactcattg
gttcctgtggaagctttaattccttacgaaaaaggcgagctccttaactcgatacatcag
gttggactggttgagagaactgaatacaaggagaatgggaccttggtgatagcacatgtt
cctcttccacttgcaaggctactagctccaatgaggcaactaactgcagcacaatga

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