Zingiber officinale (ginger): 122002305
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Entry
122002305 CDS
T08725
Name
(RefSeq) phosphoenolpyruvate carboxylase 4-like isoform X1
KO
K01595
phosphoenolpyruvate carboxylase [EC:
4.1.1.31
]
Organism
zof
Zingiber officinale (ginger)
Pathway
zof00620
Pyruvate metabolism
zof00710
Carbon fixation by Calvin cycle
zof01100
Metabolic pathways
zof01200
Carbon metabolism
Module
zof_M00168
CAM (Crassulacean acid metabolism), dark
zof_M00170
C4-dicarboxylic acid cycle, phosphoenolpyruvate carboxykinase type
zof_M00171
C4-dicarboxylic acid cycle, NAD - malic enzyme type
zof_M00172
C4-dicarboxylic acid cycle, NADP - malic enzyme type
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00620 Pyruvate metabolism
122002305
09102 Energy metabolism
00710 Carbon fixation by Calvin cycle
122002305
Enzymes [BR:
zof01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.31 phosphoenolpyruvate carboxylase
122002305
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PEPcase
PEPcase_2
Motif
Other DBs
NCBI-GeneID:
122002305
NCBI-ProteinID:
XP_042413367
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All DBs
Position
7A:complement(122515285..122554609)
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AA seq
1053 aa
AA seq
DB search
MTDTTDDIAEEISMQAFEDDCRLLGSLLQDVLHREVGPRFMETIERKRVLAQSAVNMRSI
GMEEAANLLDKQLATDISKMTLEDAVSLARAFSHYLNFMGIAETHHRVRKARHDENLSRS
CDDTFNKLIQTGVSPEELYDTFCKQEVEIVLTAHPTQINRRTLQYKHVRIAHLLEYNDRP
DLSHEDKEMLIEDLVREVTALWQTDELRRYKPTPVDEARAGLHIVEQSLWKAVPHYLRRV
SNVLKKHTGKPLPLTCTPIKFGSWMGGDRDGNPNVTAKVTRDVSLLSQWMAIDLYIREVD
NLKFELSINRCSDTLAKLAQEILLQESESEDLHSEKWNSSINQTLLKHQNQHISALPAQL
PAGAYLPACTECSDGGSEYPVVKVPGNINRQNDKKSPVQLSLSLPKTEDGGSLASPTSQS
SVTGSQKLNRSSSSQHPAQRKLFVESQIGRSNFQKLLEPSLHQRPGFTPYRVFLGNVKDK
LLKTQRRLELQLEDLPSEHDPREYYETTEQLLEPLTLCYESLHSCGSGILADGRLADLIR
RVATFGMVLMKLDLRQEASRHSETLDAVTKYLDMGLYTEWDEEKKLEFFTRELKGKRPLI
PLSIEVTSDVKEVLDTFRVAAELGSDSFGAYVISMASNASDVLAVELLQKDARLSVSGEL
GRPCPGGTLRVVPLFETVKDLRAAGSVIRKLLSIDWYREHIIKNHNGHQEVMVGYSDSGK
DAGRFTAAWELYKAQEDVVAACKEYGIKVTLFHGRGGSIGRGGGPTYLAIQSQPPGSVMG
TLRSTEQGEMVQAKFGLPQTAVRQLEIYTTAVLLATMNPPLPPREEKWRHVMEEISKASC
NYYRSTVYENPDFLGYFQEATPQAELGFLNIGSRPTRRKASTGIGHLRAIPWLFAWTQTR
FVLPAWLGVGSGLKDACDKGYQEDLKAMYKEWPFFQSTIDLIEMVVAKADIPIAKHYEEM
LVSESRRALGSQLRSELQTTEKFVLIVSGHEKLSDNNRSLRRLIENRLPYLNPLNLLQVE
ILQRLRHDDDNHKLRDALLITINGIAAGMRNTG
NT seq
3162 nt
NT seq
+upstream
nt +downstream
nt
atgacggacaccaccgacgacatcgcggaggagatttcgatgcaggccttcgaggacgac
tgccgcctcctgggaagcctcctccaggacgtcctccaccgtgaggtcggaccccgcttc
atggagaccatcgagcgcaagcgcgtcctcgctcagtctgcggttaatatgagatcgata
ggtatggaggaggcggccaatttgctagataagcagcttgcgacggacatatcgaagatg
accctcgaagacgcggtgtcgcttgctcgcgcgtttagccattacctcaacttcatgggc
attgcagaaacccaccacagggttcgcaaggcacgccatgatgaaaacttatcaagatcg
tgtgacgacacattcaacaagttgattcagactggcgtttccccggaagagctgtacgac
actttctgcaagcaggaggttgaaatagtattaactgcgcatcccacccaaataaacagg
cgtaccctgcaatacaaacatgttagaatagcgcaccttctggagtataatgacagacct
gatctaagccatgaagataaagaaatgctgatagaagatctggtacgggaggtcactgca
ttatggcagacagatgaattaagacgttataaacctactcctgttgacgaagcaagagct
ggtttgcacatagttgagcagtcactttggaaagctgtaccacattacctccgtcgtgtc
agcaatgttttgaaaaagcacactggtaagccacttccactaacctgcacacctataaaa
tttggttcttggatgggtggtgatcgagatggaaatccgaatgttacagcaaaagttacc
agggatgtttcattgctgtcacagtggatggcaattgatctttacattcgagaggttgat
aatctaaaatttgagttatctattaacagatgcagtgatacattggctaagttggcacag
gaaatcttactccaagaatcagaatcagaggacttgcattctgaaaaatggaattcaagc
ataaatcaaaccctgctaaagcatcaaaatcagcatatatctgcattgccagcacagctt
cctgctggtgcatatcttccagcttgcacagaatgcagtgatggagggtctgaatatcct
gtagtgaaagttccaggcaacattaatcgtcagaatgataaaaagtctccagttcaactg
agtttgtccttgccaaaaactgaagatggtggttctttagctagccctactagccagtca
tcagtaacagggtctcaaaaattgaataggtcaagttcaagtcagcatcctgcacaaagg
aaattatttgttgaatctcaaataggtaggtcaaactttcagaagcttttagaacctagc
ctgcaccaacgtcctggattcactccttacagggtttttcttggcaatgtcaaagataag
ctcctcaagactcaaagacggctagagcttcaacttgaggatctgccatctgaacacgat
cctagagaatactatgaaactacagagcagcttcttgaaccacttactctttgttatgag
tctttgcattcatgtggatctggcattcttgctgatgggcggttagcagatctgataaga
agagtagcaacctttggcatggtcttaatgaagcttgatttacgtcaggaagccagcaga
cattctgaaactctagatgctgttactaaatacttagacatgggattgtacactgaatgg
gatgaagagaaaaagttggaattttttactagagagctgaaaggaaaacgccctctaatt
ccacttagcatagaagtgacttcagatgtgaaagaggttctcgacacttttagggttgct
gctgaactagggagtgactcatttggtgcatatgtgatttcaatggcttcaaatgcaagt
gatgttcttgctgtagaactgttgcagaaagatgctagactttcagtcagtggggaacta
ggaagaccatgtcctggaggaacgcttagagttgtccctctgtttgaaactgtgaaagat
ctcagagcagctggctctgtgatcagaaagttactgtcaatcgattggtacagggagcac
attataaagaatcataacgggcatcaagaggttatggtcggttactctgattctggtaaa
gatgctgggcgatttactgctgcatgggaactatacaaggcccaagaggatgttgttgct
gcctgtaaagagtatggaattaaagttacacttttccatggccgaggtggcagcattggt
cgtggtggcggcccaacatatctagccatacagtcacagcctcctggttctgtaatggga
acccttcggtcaacagaacaaggtgagatggtccaggcaaagtttggtcttccccagaca
gcagtaaggcaacttgagatctatacgacggctgtacttcttgcaacaatgaatcctcca
ctcccacctagagaggagaaatggcgtcatgtcatggaggaaatctccaaggcgagctgc
aattactaccggagcactgtatatgagaaccccgatttcctaggctacttccaggaggcc
actcctcaggctgagcttggattcctgaacattggaagccggcctacacgtaggaaagcg
tccactggaattgggcaccttcgggccattccatggctcttcgcttggacccaaacaagg
tttgtgctccctgcatggctcggagtgggttctggcctcaaggatgcatgtgataagggg
taccaagaagacctcaaggctatgtacaaggaatggccttttttccagtcgaccattgat
cttattgaaatggtagtcgcgaaggctgacattcccatcgcaaaacattatgaagagatg
cttgtctctgagagcagaagggcgctaggttcccagttgaggtcagagttacagacaacg
gagaagtttgtgctaattgttagtggccatgagaaactctcggacaacaatcgaagtttg
aggaggctgattgaaaacaggttgccatatcttaatccacttaatctcttgcaggttgag
attctgcaaaggctaaggcatgatgatgataaccataaacttcgggatgcacttctcatc
acgatcaatggcattgctgcaggaatgaggaacactggttaa
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integrated database retrieval system
