Zingiber officinale (ginger): 122002381
Help
Entry
122002381 CDS
T08725
Name
(RefSeq) heterogeneous nuclear ribonucleoprotein A/B-like
KO
K14411
RNA-binding protein Musashi
Organism
zof
Zingiber officinale (ginger)
Pathway
zof03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
122002381
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
zof03019
]
122002381
Messenger RNA biogenesis [BR:
zof03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
122002381
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_PARP14_3
RRM_7
Nup35_RRM_2
Motif
Other DBs
NCBI-GeneID:
122002381
NCBI-ProteinID:
XP_042413464
LinkDB
All DBs
Position
7A:complement(124803845..124815207)
Genome browser
AA seq
358 aa
AA seq
DB search
MANKLVVLGIPWDVDTEGLREYMTKFGPMDDCVVMKERSTGRSRGFGYVTFSSAEDAKCA
LDTEHVLGNRTLEVKVATPKEEMRGPTKKATRIFVARISPSVTEAMFRTYFENYGEITDL
YMPKDQGSKGHRGIGFITFDNADAVDSIMAESHELGGSTVVVDRATPRNDEVRYPSRMPQ
GGYGAYNAYISAATRYAALGAPTLYDHFGSYGRGYFGPSRGIGRKIFVGRLPEEANAEDL
RQYFGRFGRIVDVYVPKDPKRSGHRGFGFVTFAEDGVADRVSRRTHEILGHEVAIDSATP
LDDAGPSVGGYVDPVEAYGGYGPMRNYGRLYGSLDFDDYGYGASGSSRSRMDWRYRPY
NT seq
1077 nt
NT seq
+upstream
nt +downstream
nt
atggccaacaagctcgtggttcttggaatcccatgggatgtggatacggaaggtttgagg
gaatacatgacaaagtttggtcctatggatgattgtgtggtcatgaaggagcggtcgact
ggtcgttctcgaggatttggctatgtgacattctcatcagcagaggatgctaagtgtgca
cttgatactgagcatgttcttggcaatagaactcttgaggtgaaggtggccacgcccaag
gaagaaatgagaggaccaacaaagaaagccactagaatatttgttgctaggatatcacca
tcagttacagaagcaatgttccgaacttattttgaaaattatggagaaataacagatctg
tacatgccaaaggatcaagggtccaaagggcatcgtggaattggttttatcacttttgat
aatgcagatgcagtggattcgataatggcagagtctcatgaacttggtggttctactgta
gttgttgaccgggctactccaaggaacgatgaggtgaggtatccaagtagaatgccacag
ggtggatatggtgcatacaatgcttatatttcagctgcaacacggtatgcggcacttggg
gctccgacgctgtatgatcactttggttcttatggaagagggtattttggaccttcacgt
ggtattggcagaaagatttttgtgggcagacttcctgaggaggcaaatgctgaagatctg
cgccagtactttggcaggtttggccgtatcgtagatgtctatgtcccaaaggatcccaag
cgaagtggccatagaggttttggctttgtgacttttgctgaggatggtgtagcagatcgt
gtttctcgcaggacacatgaaattcttggacatgaggttgctatagactcagctacacct
cttgatgatgccggtcctagtgttggaggctatgtggatcctgttgaggcctatgggggc
tacggtccaatgagaaactatggcaggctctacggcagcctggacttcgacgattacggc
tatggggctagtggaagcagccgatcaagaatggattggaggtacaggccttactga
DBGET
integrated database retrieval system
