Zingiber officinale (ginger): 122002438
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Entry
122002438 CDS
T08725
Name
(RefSeq) probable E3 ubiquitin-protein ligase XBOS32 isoform X1
KO
K19044
E3 ubiquitin-protein ligase XBAT32/33 [EC:
2.3.2.27
]
Organism
zof
Zingiber officinale (ginger)
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
zof04121
]
122002438
Enzymes [BR:
zof01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
122002438
Ubiquitin system [BR:
zof04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
122002438
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ank_2
Ank
Ank_3
Ank_4
Ank_5
RING_XB3-XBAT31
zf-RING_2
Motif
Other DBs
NCBI-GeneID:
122002438
NCBI-ProteinID:
XP_042413540
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All DBs
Position
7A:126875961..126890021
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AA seq
500 aa
AA seq
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MGFLSIMGNSFGCSASGERLVSAARDGDLQEAKALLEYNPRLARYSTFGVRNSPLHYSAA
QGHHEIVSLLIESGVDINLRNIRGQTALMQACQYGHWEVVQTLMLFKPNIHRTDYVNGGT
ALHFAALNGHARCIRLILADYVPSIPEFWDSMMGKSTHESTISDFDKSALSKLVNQKADG
GITALHMAALNGHAETVSLLLDLGASVSEVTTEDGSTIDLIGAGSTPLHYAACGGNAVCC
EVLIARGASLSTENVNGCTPLMVAHSWRRNWLEGILNKQLHVNIKILPSPYLSLPLMSII
KIAREFGWRSTIHSPACIDPCVVCLERRCTVAAEVCNHEFCTRCALYLCSTNSTTTIISG
PPGSIPCPLCRHAIVSFTKIPGMSPVRELPRTSLSLSICTTCPTVEGSESNERTQFCKPD
IHCTGVPPLGSSSFRSLSCQRFPSMKLHSTLCMGVPETSPCLTRCSRPGSSLTRSVSDGD
RSRRSCLFAFSHIVATAENN
NT seq
1503 nt
NT seq
+upstream
nt +downstream
nt
atggggttccttagcatcatgggtaactccttcgggtgctccgcatccggggagaggcta
gtctcggcggcgagagatggggatcttcaggaggccaaggcgcttttggagtacaatccc
cggctcgcccggtactcgacgtttggtgttcggaattcgcctctccattattctgcagct
caaggccaccacgagattgtatctcttttgattgaatctggagtcgacattaacctgagg
aacatacgaggacagactgctttgatgcaagcttgtcaatatggtcactgggaggttgtt
caaactctaatgcttttcaaacctaatattcacagaacagattatgtcaatgggggaaca
gctctccactttgctgctctaaatggccatgctcgttgcatccggcttatccttgctgac
tatgttccaagtatacctgagttttgggatagcatgatgggaaaatctacccatgaatct
actatttctgactttgacaagagtgccttgtctaaattagttaaccaaaaagcagatggg
ggcattacagcccttcacatggcagcactaaatggccatgcagagactgttagcttgctt
ttagacttgggtgcttcagtctccgaggtcacaacagaagatggctcaacaattgatctg
ataggtgctggaagtacaccccttcattatgctgcttgtggtggaaatgctgtgtgttgt
gaagttcttattgctagaggggccagcttgagcactgagaatgtgaatggttgcactcct
ttaatggtagcccattcatggcgtagaaattggctggaaggcattctgaataagcaacta
catgttaacataaagattcttccttctccatatttatctcttcccctcatgagcatcata
aaaattgctcgagaatttggttggagaagcacaatccattcacctgcatgtattgatcca
tgtgtagtttgtttagaaagaagatgcacagtcgctgctgaagtttgtaatcacgagttc
tgcaccagatgtgcgctttacttgtgttccaccaacagcacgacaactattatttcaggt
ccaccaggatcgataccctgcccactgtgccggcatgccatcgtctcgttcaccaagatt
cctgggatgagtccagtcagggagctgccccgaacaagcctttcgttatctatatgcacc
acttgcccaactgttgagggatctgagtctaatgaacgcactcaattctgcaaacctgac
atccattgcacaggggtgccacctttaggctcttcctctttcagatccttgagctgccaa
cggttcccctccatgaaactccactccacactctgcatgggagttcctgagacgagccca
tgcttgacaaggtgctcgagaccagggtctagtttgacgcgatcggtttcggatggggat
cgcagtagaagatcctgcctttttgccttcagccatattgttgctacagctgagaacaat
tga
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