Zingiber officinale (ginger): 122002458
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Entry
122002458 CDS
T08725
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 25-like isoform X1
KO
K11855
ubiquitin carboxyl-terminal hydrolase 36/42 [EC:
3.4.19.12
]
Organism
zof
Zingiber officinale (ginger)
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
zof01002
]
122002458
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
zof04121
]
122002458
Enzymes [BR:
zof01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
122002458
Peptidases and inhibitors [BR:
zof01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
122002458
Ubiquitin system [BR:
zof04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
122002458
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UCH
UCH_1
EnY2
Motif
Other DBs
NCBI-GeneID:
122002458
NCBI-ProteinID:
XP_042413570
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All DBs
Position
7A:complement(127339711..127346624)
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AA seq
667 aa
AA seq
DB search
MGLQMTWHARCRRGGASPLGLKNLGNSCYLNSVLQCLTYTPPLAQFCLSSRHSSLCKSVF
ANREKECPFCILERQIVRSLTLDGANITESPSKILKCLSLFAEHFRWGRQEDAHEFLRYV
IDACHNACLKLHKLNGCGGASGGVTNGDSKVEGRSRPTTVMNEIFGGALLSQVKCLTCNG
DSNKVDEILDICLDVFHNSSLKDALARFFQPEELDGNNKYSCSNCKKLSVAKKQMFIHRA
PNVLVIQLKRFEGIHGGKINRNIDFDELLGLSKFMSNPSQLQDLEPEYSLFGCIVHSGFS
PESGHYYAYIKDASGRWFCCNDAHVSLSSSQEVLSEKVYMLFYIRTNGCPKPTKSALSCN
GFKPSVVNGSSVQSQKTVQVLKPTIANSNGASSTNNGSALLKNGKPFSSPQIKPINLKNL
EIKRTFPNGNGNLDIQKKGASGEGITTLASCSPSENKTVQKFETSTTSNLNAASVDISFD
GQQNKHTSLLPNGNGCSQPSKRHSNSEDTEYVAATRKDSGNASSAKVKIDNHQKVNPEVH
STKSSENSDSSTNDAAPLPRENGSYKNEISCGKKHSREIEKFKELLSREASSELHSCGWV
DKVQDFMRAKKRLCLQAADVSYDKSSTRKQLISDARKTFISQIPESLKEHLVERLRSFSQ
ESPLSDP
NT seq
2004 nt
NT seq
+upstream
nt +downstream
nt
atgggtctgcagatgacatggcacgcgcgctgccgcagggggggcgcctctcctctcggc
cttaaaaacctcggcaactcttgctatcttaatagcgtcctccagtgcctcacctacacc
cctcccctcgcccagttctgcctctcctcccgccattcctcactctgcaagtcggtgttc
gcgaatcgggagaaggagtgcccattctgcatcctcgagcggcaaatcgttcgatcactc
acccttgacggagcgaatatcactgaatcgccgtccaagattctaaagtgcttgtctcta
tttgcggagcatttccgttgggggcgccaggaggacgctcacgaattccttagatatgtg
attgacgcatgccataatgcctgcctcaagctgcacaagctaaatggttgtggtggagcc
agtggaggggtgactaatggagattctaaagtggaggggcgctcgaggcccaccaccgtg
atgaacgagatctttggaggggcgttgctaagtcaggtgaagtgcctcacttgcaatggt
gattcaaacaaggtggacgagattttggatatctgtctcgatgttttccacaacagctcc
ttgaaggatgctcttgctcgattttttcagccagaagaattggatggcaacaataaatac
agctgcagcaattgtaagaaactctcagtagcaaagaagcagatgttcatacatcgagca
ccaaatgttctagtcatccaactcaagagatttgaaggcatacatggtgggaagattaat
cgaaacattgattttgatgagcttcttgggctttcaaagttcatgtccaatccgagtcag
ttgcaggatctggagccagagtacagtcttttcggttgtatagtacactcaggtttctca
ccagaatctggacattattacgcttacattaaggatgcttctggtcgatggttctgttgt
aatgatgcccatgtttcactttcaagctcacaagaagttttgtcagagaaggtttacatg
cttttttatatacgcaccaacgggtgcccaaagcccaccaaatctgctttatcttgcaat
ggcttcaaaccttctgttgtaaatggaagcagtgttcaaagccagaagactgtacaggtt
ctaaaaccaactattgctaattccaacggggcatcttctacaaataatggctcggcattg
ctgaagaacggtaaaccattttcatctccgcaaattaagcccattaatctcaagaatctt
gagataaaaaggactttcccaaatggtaatgggaaccttgatattcagaaaaaaggagct
agtggagaaggcataacaacacttgctagctgttccccaagtgaaaataagacggtacaa
aaatttgagacatcgacaacttctaatctcaatgcagctagtgtagacatatcattcgat
gggcagcagaataagcatacgtctcttttgccaaatggaaatgggtgctctcagccatca
aagagacactcgaactcggaggacactgagtatgtagcagctacaagaaaagattctggt
aatgctagttcagctaaagtgaagattgataatcatcaaaaagttaatccagaagtacac
agtacgaaaagcagcgaaaattctgattcaagcactaatgatgccgcccctttgccaagg
gaaaatggctcatacaagaatgagatatcatgtggcaaaaaacattcgcgagaaattgaa
aagttcaaagaattgctatcccgagaagcctcatccgaacttcactcttgtggatgggtg
gataaagttcaagactttatgcgagctaaaaaaagattatgcttgcaagcagcagatgtc
tcttatgataagagttcaacaaggaaacaattgataagcgatgcaaggaagactttcatc
tcgcaaattccagaatcgcttaaggagcatctcgtcgaacgcctaagatcttttagtcaa
gaatcacctctttcagatccgtaa
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