Zingiber officinale (ginger): 122002579
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Entry
122002579 CDS
T08725
Name
(RefSeq) putative ABC transporter B family member 8
KO
K05658
ATP-binding cassette, subfamily B (MDR/TAP), member 1 [EC:
7.6.2.2
]
Organism
zof
Zingiber officinale (ginger)
Pathway
zof02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
122002579
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
zof02000
]
122002579
04147 Exosome [BR:
zof04147
]
122002579
04090 CD molecules [BR:
zof04090
]
122002579
Enzymes [BR:
zof01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.2 ABC-type xenobiotic transporter
122002579
Transporters [BR:
zof02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB1, 4, 5 subgroups
122002579
Exosome [BR:
zof04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
122002579
CD molecules [BR:
zof04090
]
Proteins
122002579
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_22
Zeta_toxin
AAA_16
RsgA_GTPase
AAA_29
AAA
ABC_ATPase
AAA_24
AAA_15
HUTI_composite_bact
Motif
Other DBs
NCBI-GeneID:
122002579
NCBI-ProteinID:
XP_042413727
LinkDB
All DBs
Position
7A:130864705..130887133
Genome browser
AA seq
1234 aa
AA seq
DB search
MEGEGKAEGEEAKGHGHGSVFLFADWVDVVLMVMGTAGAVGDGCSVNCLLLFASGVMNSL
GYGKAHSSGLLDHADFMKDVEKYCLYFVYLGLAVLLVAFLEGYCWSKTSERQVLRIRHKY
LEAILRQEVAFFDSQEATTAEIINSISKDTSLIQEVLSEKVPLFIMHSSTFVSGLVFSTY
FSWRLSLVALPLVLLLIIPGLIYGKYLLYLSRRSREAYGKANAIAEQALSSVKTIYSFTA
EKSIVERYAGILDMTVKLGIKQGVAKGLAVGSTGLSFAIWAFLAWYGSRLVMYHGESGGR
IYAAGISFVLGGLSLGMALPEVKHLTEASVATKRIVERINRRPRIDAEDQKGLRMEEMHG
EVEFEGVRFAYPSRPEAAVLRDFSLRVPAGQTVALVGTSGSGKSTAIALLQRFYDVDAGE
VRVDGVDIRKLQLRWIRGKMGLVSQDHALFGTSIKENILMGKPGATATEMYAAAMTANAH
NFIRQLPEGYETKIGERGALLSGGQKQRIAIARAVIKNPVILLLDEATSALDSESEKLVQ
NALDQASMGRTTLVVAHKLSTIKNADQIAVVDSGRIVEIGTHDELIAQSNSHYSRLVKLQ
RISSNLDPEPESFRPSSVARSSASRLSVTKASPSSFSAFSEEQSTIAATAPAPSFSRLLA
MNAPEWKQAVVGSLSAIVFGSIQPIYALSIGGMIAAFFLQDHNEMKAAIRRYALIFSSLS
LVSILVNLLQHYSFAYMGERLTKRVRIRALEKILTFEVAWFDDDAHSSGALCSRLSNEAA
LVKTLVADRVSLLLQTASGVVVAMTMGLIIAWKLALVMIAIQPSTMICHYAKKVVLSRVS
VALAKAQHSSTQIAVEAVYNHRMVTSFGCADKVLELFTEAQEEPVRASRKKAWVAGLATG
SSPCLSFLAWALDFWYGGRLAQSGEISAGDVFKTFFILVSTGKMIAEAGSMTSDLAKGAT
AVASVFEVLDRQSFIPASSSSSASSNGESKKIHGKIEIRKVDFAYPARPQCPVLRGFSLE
VKAGTSMALVGRSGCGKSTVVSLIQRFYDVDRGVVRIDNTDVRELDLIWFRGFTALVSQD
PVLFSGTVRDNIALGKPNSTEDEIVEAARAANAHDFISSLKDGYGTNCGERGVQLSGGQK
QRISIARAIVRNPTILLLDEATSALDVESERAVQEALDRIMVGRTTVVVAHRLNTIKNLD
SIAFLGEGKVMERGSYAQLIAKKGAFFDIAALSA
NT seq
3705 nt
NT seq
+upstream
nt +downstream
nt
atggagggagaaggcaaagctgaaggagaggaagccaaaggacatggccatggatcagtc
ttcttatttgcagattgggtggacgttgtgctgatggtgatgggaaccgcgggagctgtg
ggagatggatgctcggtcaattgccttcttctcttcgccagcggagtcatgaacagctta
ggctacggcaaggctcacagctctggccttcttgaccatgcagatttcatgaaggacgta
gagaagtattgcttgtactttgtgtacttgggattggcagtgctgctggtggcctttttg
gaagggtattgttggagcaaaacgagtgagaggcaggtgctgaggatcagacacaagtat
ttggaagctattctgagacaagaggttgcattctttgattcacaagaggcaacaacagca
gagatcattaacagtatctcaaaggacacttctctaattcaagaagtgctaagtgagaag
gtgccgcttttcatcatgcactcttccaccttcgtctccggcctcgtcttctccacctac
ttctcctggaggctctccttggtggcgcttcccctcgtcctcctcctcatcatccccggc
ctcatctacggcaagtacctcctctacctctcccgcaggtcccgcgaggcatacggcaaa
gccaacgccatcgccgagcaggcgctcagctccgtcaagaccatctattccttcaccgcc
gagaagagcatcgtggagaggtacgccggcatcttggacatgaccgtgaagctaggcatc
aagcagggcgtcgccaagggactcgcagtgggaagcacgggcttgtccttcgccatctgg
gccttccttgcttggtatgggagcaggctggtgatgtaccatggagagagcggtggccgg
atttatgcagccgggatttccttcgttttgggcggattatctctgggcatggcgctgcct
gaggtgaagcacttgacggaggcatcggtggcgacgaagagaatagtcgagaggatcaac
agacgaccgcggatcgatgcggaggatcagaaggggttgagaatggaggagatgcatggc
gaggtggagttcgagggcgtccggttcgcgtacccttcgcggccggaggccgccgtgctt
agggacttcagcctccgggtcccggcggggcagacggtggcgttggtaggcaccagcggg
agcggcaagtcgaccgcaatcgcgctgctgcagcggttctacgacgtggacgccggcgag
gtgagggtcgacggcgtggacatcaggaagctgcagctgaggtggatcagaggaaagatg
gggctagtgagccaagaccatgctctcttcgggacgtcgatcaaggagaatattctgatg
gggaagcccggagccaccgccacggagatgtacgccgccgccatgactgcgaatgctcac
aacttcatccggcaattgccggagggatacgagaccaagatcggggagagaggcgcgctt
ctatccggcggccagaagcagcggatcgccatcgccagagcagtcatcaagaatcctgtc
attcttcttctcgatgaagccaccagcgcgctcgactccgaatcggagaagctggtccag
aacgccctcgatcaagcctccatgggaagaacaacactggtggtcgctcacaagctgtcc
acgatcaagaacgccgaccaaattgcggtggtcgattccggaaggatcgtcgagatcggc
acccacgacgagctcatcgctcagagtaacagccactactcgcgcctggtgaagctgcag
aggatttcgagcaatctcgatccggagccggaatccttccgcccttcctccgtcgcgagg
agcagcgcgagccgcctcagcgtcacaaaagccagcccctcttccttctcggccttctcc
gaggagcaatctaccatcgccgccaccgcccctgcgccatccttctcccggctccttgcg
atgaacgcgcccgagtggaagcaggccgtcgtcggcagcctctccgccatcgtatttggc
tccatacagcccatctacgcgctctcgatcggcggcatgatcgccgccttcttcctccag
gaccacaacgagatgaaagccgccatccgccgctatgctctaattttctcctccctctca
ctggtttcgatcctggtcaatctgttgcagcactacagcttcgcctacatgggcgagcga
ttgacgaagcgtgttcggatccgggcgctggaaaagatcctaactttcgaggtggcgtgg
ttcgacgacgacgcgcactccagcggcgcgctgtgctcgcggctgagcaacgaggcggcg
ctggtaaagacgttggtcgcagaccgcgtgtccctgctgctccagaccgcctccggggtg
gtcgtcgccatgaccatggggttgatcatcgcctggaagctcgccctggtcatgatcgcg
atccagccgtcgacgatgatctgccactacgccaagaaggtggtgctgtcgcgggtatcg
gtggcgctagcgaaggcgcaacacagcagcacgcagatcgccgtcgaggccgtgtacaac
caccggatggtgacttccttcgggtgcgccgacaaggtgctggagctgttcacagaggcg
caagaggagccggtgagggcgtcgaggaagaaggcgtgggtggcgggcctggcgacagga
agctcgccctgcctgtcgtttttggcgtgggcgttggacttctggtacggaggtagattg
gcgcagtccggcgagatatccgccggagacgtgttcaagaccttcttcattttggttagc
acggggaagatgatcgccgaggccggcagcatgacttccgacctggccaagggcgccacc
gctgtggcgtcggtgttcgaggtgttggaccggcagtccttcataccagcttcttcctcc
tcctccgcttcttctaatggcgagagtaagaagatacacgggaagatcgagatccggaag
gtcgacttcgcgtacccagcgcggccgcagtgcccggtgctgcgtggcttcagcttggag
gtgaaggccgggacgagcatggccttggtcggccggagcggctgtggcaagtccaccgtc
gtcagcctgatccagcgcttctacgacgtcgaccgcggcgtcgtccgcatcgacaacacc
gacgtccgggagctcgacctgatctggttccgcggcttcaccgccctggtcagccaagac
ccggtcctcttctccggcaccgtccgcgacaacatcgccctgggcaaacccaactccacc
gaggacgagatcgtcgaagccgcacgagccgccaatgcccatgacttcatctcatcgctc
aaggatggatacggaaccaactgcggggagcggggggtgcagctgtcgggagggcagaag
cagaggatctcgatcgcgagggcgatcgtgcggaacccgacgatcctgctgctggacgag
gcgacgagcgcgctggacgtggagtcggagagggcggtgcaggaggcgctagaccggatc
atggtggggaggacgacggtggtggtggcgcaccgcctgaacaccatcaagaatctcgat
tccatcgcttttctcggcgaggggaaggtgatggagcgggggagctacgcgcagctgatc
gccaagaagggcgccttcttcgacatcgccgctctatctgcctga
DBGET
integrated database retrieval system
