KEGG   Zingiber officinale (ginger): 122002580
Entry
122002580         CDS       T08725                                 
Name
(RefSeq) MMS19 nucleotide excision repair protein homolog isoform X1
  KO
K15075  DNA repair/transcription protein MET18/MMS19
Organism
zof  Zingiber officinale (ginger)
Brite
KEGG Orthology (KO) [BR:zof00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:zof03400]
    122002580
DNA repair and recombination proteins [BR:zof03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    Other NER factors
     122002580
SSDB
Motif
Pfam: MMS19_N MMS19_C HEAT_2 HEAT_EZ KRAB
Other DBs
NCBI-GeneID: 122002580
NCBI-ProteinID: XP_042413728
LinkDB
Position
7A:complement(130887098..130913208)
AA seq 1135 aa
MEKSSTLISHIEAFVDSARVLNQHAKSVDAISSLIKNDLLTLEALVREMELYLTSTDHII
RGRGTLLLAEVLNCLLEKPLDGHTISILVEFFTAKLEDWQVLWGVLVGCLALLKRTKKFG
MVDNSDARTLAKSFLINVQVQSLAVRDRKLCLEVLQCLLDAYTDAVVVLGDDLVYGICEA
IDEEKDPRCLMLNFHLVEILGHLYPDPSGPMASFAQDIFDILSRYYPIYFTHPKDDGFDI
KREDLSKGLMNAFSSSPFFEPFVVPLLLEKLSSSLLSAKLDSLKYLNSCLYHYGGKRMVK
HSRVIWSNLKEVIFNFSPERPLLTDELDVDMKSEVNQIRMEALNCLETALSCFDSSEQDS
FLCLIIDDPDIGTKLESLTSITSYSGTSAEIQRDLSAIGGIFTSIAKVSIYCCNKVFLKF
FPCLMDVLGVSRNHSSQFCITNHKTVHGGMNFGALFLSVELLSSSRELSLVSNIAAEFIA
ESKSWFFMLKSFSMDLCHVLGSVLRSSNTSMVASEKEGVLCAVKGLRSLSTFPSSCSPIS
EGCYEDVLEILMSIITGRSDETYLWNLSLKALVQIGLWIESASGHDSARGICYNKVVEKI
LSMLQTNDSTVSLSLKLVAISEIANVGQYVLSIIRALEDAIISSLVACIQGGLKSSDSLV
GLLECYTSRVLPRCCSSGSFDDVAVQFSINIWNQLENVSVFNTDVTMQKVLDQVMITMKL
LVAGCTVENQSLILKKAHCVILSMDFLKAQPFQSIHGIIALSCRDKWIASLFGSVVIALR
SQTPLTDMKVILNLFLILLPEGNLPAAQALASMVNKCPSSINEPEISARLSLDQACEDIL
KLCLWTLESNSHLKQYNFLDRDICSQRSIVLGMAWVGKGLLMRGHEKVTEIAMFLMKCLV
SDSNEDITLQQQKENGKGVGMEWNSSLATSAADAFHVLLNDSEDCLNKKFHATIRPLYKQ
RFFSSMLPILLSSIKESGSTSKKIALYRALGHIISDTPLAAVLAESKKIIPALLDTLAIS
GSETSHKKIVYSLLLVLSGILMDDNGKVTILENIHTVIECLIKLISYPDLMIVRETAIQC
LVAMSVLPHARIFPFRPRVLKAVATALDDRKRAVRQEAVRCRQAWASIASRSLQF
NT seq 3408 nt   +upstreamnt  +downstreamnt
atggagaaatctagtactttgatctcccacatcgaagcattcgtggactcggcccgcgtt
ctcaaccaacatgccaaaagtgtggacgcgatttcttctctgataaagaatgatctgtta
accctggaagcattggtgcgagaaatggagctgtacttgacctccacagaccatattatc
cgtggtagaggtacacttctccttgcagaagtacttaattgccttcttgagaagccatta
gatggtcatactataagcattttggtagaattcttcacagcaaagctagaagattggcaa
gtactctggggagttcttgttggttgcctagctcttttgaagagaacaaaaaagtttggc
atggttgacaatagtgatgcaagaacacttgcaaaatctttcttaattaatgtacaagtg
caatcactagcagttcgtgaccgtaagttatgtttagaagttcttcagtgcctattggat
gcttatactgatgctgttgtggtgttgggtgatgaccttgtttatggaatatgtgaagca
atagatgaagaaaaagatcctcgatgcttaatgcttaattttcatcttgttgagattctt
gggcatttgtatcctgatccatctggcccaatggcaagctttgctcaggacatctttgat
attttaagtcggtactatcctatatacttcacacatccaaaggatgatggttttgatata
aaaagggaagatctctctaagggattaatgaatgctttctcttcatctcctttttttgaa
ccatttgttgtgccactactccttgaaaaactgtcctcatctcttctatctgctaagctt
gattctttgaagtatcttaacagttgtttataccactatggagggaaaaggatggtcaag
cattctagagttatctggtctaatctaaaagaagtgatctttaatttctcacccgagaga
ccattattaactgatgaattggatgtagatatgaaatccgaggttaatcagattagaatg
gaagctctaaattgtttggaaacagctctctcatgcttcgattcttctgaacaagattcc
tttctatgcttgattattgatgatccagatattggaacaaagttagagtcactgacaagc
ataacaagttattcaggtacttctgctgaaatccagcgcgatttaagtgctattggaggt
atctttactagcatagcaaaggtatcaatatattgctgcaataaagtgttcctgaagttc
tttccctgcctaatggatgttttaggagtttctagaaaccattcttctcaattttgtatc
actaaccacaaaacggttcatggcggaatgaattttggagcactttttctgtccgttgaa
ctccttagttcgtctagagaattatctttggtatctaatattgcggcagagttcattgca
gagtcaaagagctggtttttcatgctcaaaagtttctctatggatctttgtcatgttctc
ggttcagtattgaggtcatccaatacttctatggttgctagtgaaaaagaaggtgtgctt
tgcgcagttaagggcttgcgatcactttcaacatttccgtcatcctgttcacctatatca
gaaggctgttatgaagacgttttagagatacttatgtctataattactggcaggagtgat
gaaacttacttgtggaatttgtcattgaaagccttggtccaaattggattgtggattgag
agtgctagtggtcatgattctgctagaggaatatgctacaacaaagttgttgagaaaatc
ctttccatgcttcaaactaatgattctaccgtctctctctcattgaaacttgttgcaatt
tctgaaattgctaatgttggtcaatatgtgctaagtataattcgagcacttgaagatgcc
attatttccagcttggtggcttgcatccaagggggcctaaaatcttctgacagcttggtt
ggtttgctcgaatgctacaccagtcgggttcttccaagatgctgttcttctgggagtttt
gatgatgttgcagttcaattttccatcaatatttggaatcaacttgaaaatgtatctgtt
ttcaacactgatgtaactatgcagaaggttcttgaccaggttatgataacaatgaagctt
ctcgtggctggttgtacagtggaaaaccagtccctgattctaaaaaaagctcactgcgtt
attttatcaatggactttcttaaagcacaaccttttcaaagtattcatggaattattgcc
ctctcttgtcgagataaatggattgcatctctttttggatcagtcgtgatagcacttcgt
tcccagactcctttgacagatatgaaagtaattttgaacttgtttctgattcttctacct
gaaggaaatctgccagcagctcaagctctggcatctatggttaataaatgtccttccagt
attaatgaaccagaaatttcagctaggctttctttggatcaggcgtgtgaagacatccta
aaactttgtttatggactttagaaagcaacagccatttgaaacaatacaattttcttgac
agagatatttgttcccagaggtctattgtccttgggatggcatgggttggaaaaggtttg
cttatgagaggacatgagaaagtaacagaaattgcaatgtttcttatgaaatgtctagtt
tctgacagtaatgaggatattacacttcaacaacagaaagagaatggaaaaggtgttggg
atggaatggaattcctctttggcaacatctgcagccgatgcattccatgtgcttctgaat
gattcagaagactgtttaaataagaagttccatgcaacaataaggccactttataaacaa
cgttttttctcaagcatgctgccgatccttctctcttcaatcaaagaatcaggttcaaca
agtaaaaagatagcattataccgtgctcttggacacattatttcagacacaccattggct
gcagtgcttgctgaatccaagaagatcatacctgctctactcgataccttagctatttcg
gggtctgaaacttcacataaaaaaatagtatacagcctactactagtcttatctggaatt
ctgatggatgataatggtaaagtgaccatattggaaaacatacatacagttattgagtgt
cttatcaaactgatttcctaccccgatttgatgattgtccgtgagactgcgattcaatgc
ctagtggccatgtcagttcttcctcatgcaaggatttttccattccgaccaagggttctt
aaagctgttgctaccgctctggatgatcgaaagagggctgttcggcaggaggctgtcaga
tgccgtcaagcatgggcctcaattgcatcgagaagtcttcagttttga

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