Zingiber officinale (ginger): 122002594
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Entry
122002594 CDS
T08725
Name
(RefSeq) YTH domain-containing protein ECT1-like isoform X1
KO
K20102
YTH domain-containing family protein
Organism
zof
Zingiber officinale (ginger)
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
zof03019
]
122002594
Messenger RNA biogenesis [BR:
zof03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
122002594
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
YTH
NUC153
Motif
Other DBs
NCBI-GeneID:
122002594
NCBI-ProteinID:
XP_042413747
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All DBs
Position
7A:complement(131301124..131306528)
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AA seq
588 aa
AA seq
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MDAKARPAKPIDEAIKTLKIDPPSKATSVTMFGAKGASLSDATSCISSGDATSIIKESEV
DQDVSVDDQGTYYYGYYYPGAHGVMGEWDNSRCNRGTDNVQVEHPVSTIQVDSGSLIYYL
PGFQTGYSNYGPFSPGPMYCADGQFWGQGSYYASPVSPQTVVSPGIYAHPIAYGPELIPA
YPWDPYFFLQDGIQGNTFTVDPTNPHYKPNHSSHGHNLPPSKTLTTSKVTSLASDLSLPV
SAQNQTQKSVQKAPTAVLPKGYVPLNKFSAYANQVNGALHYPNSVIPMKENTRCWVDDEK
LKARNKLNSFADLDLLNERNRGPRTNSIKTTNSGDNFQETLSIKQNDNSSGSIDKDEYNS
PDFITKYEQALFFVIKSYSEDDVHKSIKYNVWSSTPNGNKRLDNAFLAAQGKMAEKGGKC
PVFLFFSVNASGQFCGVAEMSGRVDFSKNMPFWQQDKWNGFFPVKWHIIKDVSNPRLRHI
ILENNENKPVTNSRDTQEVKFPQGTEMLNIFKSYSAKTSILDDFGFYENRQKAMQEKRSK
PTTPTLDNSLSKMVESSQFQKLDDSKSHKLVLVEVKEALPCSRVTSPK
NT seq
1767 nt
NT seq
+upstream
nt +downstream
nt
atggacgctaaggcgaggccggcgaagcccattgatgaagcaattaagacattgaagatc
gatcctccgtcaaaagccaccagtgtcaccatgttcggtgcaaaaggtgcaagcttgtct
gatgcaacatcctgcatctcttccggagatgcaacaagcatcatcaaggaaagcgaggta
gaccaagatgtgtctgtggatgatcagggcacatattattatggttactattatccagga
gctcatggtgtcatgggggaatgggataattcacgttgcaaccgtggaacagataacgtc
caagtagagcatcctgtaagtaccattcaagttgatagtggatcactgatatactacttg
ccaggatttcaaactggatatagcaactacggtccattctcacctggacccatgtattgt
gctgatggacagttttgggggcaaggctcatattatgcaagtccagtttctcctcaaacg
gttgtttcaccaggaatttatgctcatccaattgcttatgggcctgagctaattcctgca
tacccatgggatccatattttttcttgcaagatgggattcaagggaacacatttactgtg
gatccaacaaatccacattataaaccaaatcattcatcccatggtcataaccttcctcct
tccaaaaccttgacaacttcaaaagtgacttcactagcatctgatttatcacttcctgta
tcagctcaaaaccaaacacagaaatctgtgcagaaggcacccactgctgttttaccaaaa
ggatatgttcctctaaataagttcagtgcatatgctaaccaagtgaatggtgcattgcat
tatccaaacagtgtcattcctatgaaagaaaatacacgttgctgggttgatgatgaaaag
ctgaaagccagaaataaacttaatagttttgctgatctcgacttgctgaatgagcgaaac
cgtggtcctagaacaaatagcatcaaaactactaattctggtgataattttcaggaaact
cttagcatcaaacagaatgataatagcagtggttcaattgacaaggatgaatacaactct
cctgatttcataacgaagtatgaacaagctttgttttttgtaataaaatcatacagcgaa
gatgatgttcataaaagtataaaatataatgtctggtcaagcactccaaatgggaacaaa
aggcttgacaatgccttcctagctgctcaaggaaagatggcagaaaagggtggcaagtgt
cctgtgtttctcttcttttctgttaatgcaagcggtcaattttgtggtgttgcagaaatg
tcaggccgagttgatttcagtaaaaatatgcccttttggcaacaggacaaatggaatggc
tttttcccagtgaagtggcatataattaaagatgtttcaaacccacgactccgtcacata
atattggagaataatgagaacaagcctgtaacaaacagcagggatacgcaagaggttaag
tttccacaaggcactgagatgttaaacattttcaagagctattctgctaaaacgtccata
ttggacgactttggcttttacgagaatcgccagaaagcaatgcaagagaagaggagcaag
cctactactccaactttggataactctctgtccaaaatggttgaatcatctcaattccag
aagctagatgattccaaatcacataaacttgtgttagtcgaggtgaaggaagcactccct
tgctcgagggtcacttcacctaagtga
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