Zingiber officinale (ginger): 122002602
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Entry
122002602 CDS
T08725
Name
(RefSeq) E3 SUMO-protein ligase MMS21-like
KO
K22756
E3 SUMO-protein ligase NSE2 [EC:2.3.2.-]
Organism
zof
Zingiber officinale (ginger)
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
zof04121
]
122002602
03400 DNA repair and recombination proteins [BR:
zof03400
]
122002602
Ubiquitin system [BR:
zof04121
]
Ubiquitin ligases (E3)
UBL E3 ligases
122002602
DNA repair and recombination proteins [BR:
zof03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
SMC5-SMC6 complex
122002602
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-Nse
PDE4_UCR
GrpE
Kinesin_assoc
Zf_2nd_IFT121
Zn_ribbon_8
DUF6951
zf-MIZ
Motif
Other DBs
NCBI-GeneID:
122002602
NCBI-ProteinID:
XP_042413761
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All DBs
Position
7A:complement(131528551..131534509)
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AA seq
250 aa
AA seq
DB search
MATTSTSRSHNSTAPRIRNAASTLFSDNQSLISDIRKAITMMKNVAVDLEKEQQSEKVKE
LENSILELLETYDDCARFSEAIQTIGSNYIPSEQPTDFKRLLEDEVAKSKESSPSMPQNN
PLYRQFKEAIWNVHHAGQPMPGEEQEDIVMTSTQNNLLNTKCPLTGKPVIELQNPVRCMD
CKHIYEKEPVIHYISTKKPHPRCPVAGCPKILQVGRVVCDALLTIEIDEMRLASATNINS
TVVEDFTEVD
NT seq
753 nt
NT seq
+upstream
nt +downstream
nt
atggcgacgacatccacttctcgctcgcacaactccacggccccccgaataagaaacgct
gcatcaaccctcttttccgacaaccaatccctcatctccgacattcgaaaagccataacc
atgatgaagaatgttgctgttgacttagagaaggaacaacagtccgagaaagttaaagag
ctggaaaattccatcttagagctgctggagacatacgatgattgtgctcgtttctcggag
gcgatccagacaattggcagcaattacataccatctgagcagcctactgatttcaagagg
ttgctagaggatgaggtagctaaaagcaaggaatcttctccttcaatgcctcagaacaat
ccattatatcgtcagttcaaggaagccatatggaatgttcaccatgctggtcaaccaatg
cctggtgaggagcaagaagatatagtcatgaccagtacccagaataatctattaaatacg
aagtgccctttgacaggaaagcctgttatagaattgcagaatcctgtccgctgcatggat
tgcaagcacatttatgagaaggaaccagtaatccactacataagcacaaagaaaccacat
cctcgatgcccagttgcaggttgcccaaaaattctccaagttggacgggttgtatgcgac
gccttgcttacaatagaaattgatgaaatgcgtttggcatcagctacaaacataaactca
acagtggtagaagattttacagaagttgactga
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