Zingiber officinale (ginger): 122002626
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Entry
122002626 CDS
T08725
Name
(RefSeq) sister chromatid cohesion protein SCC4-like
KO
K11266
MAternally affected uncoordination
Organism
zof
Zingiber officinale (ginger)
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
zof03036
]
122002626
Chromosome and associated proteins [BR:
zof03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Adherin complex
122002626
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cohesin_load
TPR_12
Motif
Other DBs
NCBI-GeneID:
122002626
NCBI-ProteinID:
XP_042413792
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Position
7A:132232291..132244768
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AA seq
721 aa
AA seq
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MEAVVEGLWSLAEEAELRRDYGAAVKCLEALLQSDASLLPLVEIRTRLRLAYLLLNRSYN
LNHAKAHLERGLLLLSSAPSASLHLKLSAHSLLARCYHLVGAIPAQKHIILRALNLLSSS
ADGRGAAALPATDTLLWSANFHSQLGSNLAIDGDYPGALSTLASGLAAATELGSSELQLF
FAASSLHVHLLHWEDSQSVEANVRQCLELWESIPFDQRQHHIGLFFYNELLQTFYLLRIC
DYKAAAQHVEKLDAAMKNEHQKVQYIKELVQDLNSVNGMLSRSNLQKKDRLALFEKQGQI
QEQLRAATGEDSTRRLLDIEEKLLLAPPPMDGEWLPRAAVFALVDLMVVMLNRPKGVFKE
CGRRIQSGLELIYEELEKLGIADGSREVDLQHSAIWMAGVYLVLLMQFLENKVAVELTRS
EFVDAQEALMQMKNWFIRFPTILQGCESTIEMLRGHYSHSVGCFHEAVFHFVEATKLTES
RSVQSVCQVYAAVSYICIGDPESSSKALDLVGPVFRIMDSFVGVREKTCIIFVYGLLLMR
QHNLQEARIRLASGLKIAHQQLGNIQLVSQYLTILGTLALQLHDTVQAREILKSSLTLAK
TLYDIPTQIWVLSVLTALYQEIGERGNEMENSEYERKKEDDLQKRLSEALSHLHHQDLIE
KARFSVQQPHELATRRVISGPSAKVDLDIPESVGVPMPQPAAMLSSKLREIDSVRRGKMK
M
NT seq
2166 nt
NT seq
+upstream
nt +downstream
nt
atggaagccgtcgtggagggcctgtggtcgctggcggaggaggcggagctccgccgcgac
tacggcgccgccgtcaagtgcctggaggccctcctccagtcggacgcatccctcctcccc
ctcgtcgagatccgcacccggcttcgcctcgcttacctcctcctcaatcgctcctacaat
ctcaaccacgccaaagcgcacctcgagcgcggactcctcctcctctcctcggccccctcc
gcttccctccacctcaagctcagcgcgcactccctcctcgctcgatgctaccacctcgtc
ggcgccatcccggctcagaagcatatcatcctccgcgccctcaacctgctctcctcctcc
gctgatggccgcggcgccgccgccctccctgcgactgacactctgctctggtcagccaac
ttccattcccagctcggttctaaccttgctattgatggggattacccaggtgcgctctcc
actctggcctctggtcttgctgcggcgactgagctaggcagttccgagcttcagctcttc
tttgccgcctcttctctccacgtgcatctccttcactgggaagactctcagtcagttgag
gctaatgttcgccagtgccttgagctctgggaatccatccctttcgatcagagacagcac
cacattggcctgtttttctacaacgagttgcttcaaacgttctatttactgaggatatgc
gactacaaggcggcggctcaacacgttgaaaaacttgatgctgccatgaagaacgagcac
cagaaggttcaatatattaaagaattggtccaagaccttaattctgtgaatggtatgctc
tcccgttcgaatttgcaaaagaaagatagattggctctgtttgagaagcagggccagatt
caagagcaattgagagcagctactggcgaggattcaactaggaggttgttggacattgag
gagaagttgctgttggcgcctccacctatggatggggagtggcttccgagagctgctgtt
tttgcgttggtggatctaatggttgtcatgttgaatcgcccaaaaggagtatttaaggag
tgtggaaggaggatacaatctggattggagctaatttatgaggaactcgagaaattggga
attgccgatggctcgagagaggtggatttgcagcactcggcaatttggatggccggggtt
tatttggtgcttctcatgcagttcttggagaataaagtagctgtagaacttactcggtca
gagtttgttgacgctcaagaggccttaatgcaaatgaagaattggtttatccgtttccca
acaatccttcaaggatgtgaaagcactattgagatgttaagagggcattattctcactct
gttggttgcttccatgaggcagtttttcattttgttgaagctacaaagctcactgaaagc
agatctgtgcaatctgtgtgccaagtttatgcagctgtctcctatatttgtataggggat
cctgaatcatcttctaaggctctcgatttggtagggccagtattcagaatcatggattca
tttgttggtgtacgagaaaaaacatgtattatctttgtttacggccttctgctgatgagg
caacataatctacaagaggcacgaatccgactcgccagtggcttgaaaatcgcgcaccaa
caattgggtaatattcaactcgtatctcagtacttgaccatcttaggtactttagccctt
cagctacatgacactgttcaagctagggagatattgaagtcatcattgacacttgcaaag
acgctttatgacattccaacccaaatatgggtactttctgtcttgacagcattgtaccaa
gaaattggagagaggggaaatgaaatggagaactcagaatatgaaagaaaaaaggaagat
gacttgcaaaagaggttatctgaagctctttcccaccttcatcaccaggacctgattgaa
aaggcaagattcagtgttcagcaaccacatgaacttgccacaagaagagtgatctctggt
ccatcagcaaaagttgacctggacattcctgaatcagttggcgtgcccatgcctcaacct
gctgcaatgttatcctcaaagttgcgagaaattgactcagtgagacgagggaagatgaag
atgtag
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