Zingiber officinale (ginger): 122002645
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Entry
122002645 CDS
T08725
Name
(RefSeq) far upstream element-binding protein 3-like
KO
K13210
far upstream element-binding protein
Organism
zof
Zingiber officinale (ginger)
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
zof03019
]
122002645
03041 Spliceosome [BR:
zof03041
]
122002645
Messenger RNA biogenesis [BR:
zof03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
122002645
Spliceosome [BR:
zof03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
122002645
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
KH_1
KH_KhpA-B
KH_2
KH-I_KHDC4-BBP
KH_N4BP1_1st
Motif
Other DBs
NCBI-GeneID:
122002645
NCBI-ProteinID:
XP_042413826
LinkDB
All DBs
Position
7A:132718071..132727680
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AA seq
762 aa
AA seq
DB search
MADSGVEMAAAGEVEEEIKTSGEEEAMQVNESEAAADEIVAAAGNHKRKHEDLEPSDDAE
DAPAKKQEVSTETLAVADVETRSGNGEVAEDASVEDSDEVKADLVANADQNLEVSEVVEV
KTDDQVEQQLAGTDGLVPVETDKEIKESETETDENGNIPSEKDPESFASPPIDSEVVSHK
IEIPNNKVGVLIGKAGETIRYLQFNSGAKIQITRDAEADPNSTTRSVELIGAFESINKAE
KLIKDVIAEADAGGSPSLVARGFGTLQSGGEQFEIKVANEKVGLIIGKGGETIKNLQTRS
GARIQLIPQHLPEGDPSKERIVRITGDKRQIESAKEMIKDVMNQTPRASHLSSHSQQNYR
ARGSNLQPHWTARATSPAQRGGHDYQQRGSYPPQSAHYPQPYGGYSQQSAPRGGFGNAGW
DQRSSAPAHNAPTSVYDYYGNGCPPSGAQASMANPMSGPSPAPMNYGQSQPPNYGHSAPY
GQPTPMQQNYNQSYNDPRYDSQAPNQQFYNQQSMGPQPNAYGQGTTHTGYTQQPPYNKAA
YGASQEGPYGVPHQEGPPSYGVPPRASQPGDPTYQGYGPPSYGSGAQQYPYGSNAASQPA
PAYNQTYGPASGATDGYAQPPQAVYTQQGGQAPGYGQAGQQASAYSQPSSQPSAYGQYPT
PQQGYADPSSGNTNYGYHGGPAQAAYGNNIPASGYASAPAAGSQPGYAQQPSNPSGYYDQ
TMAPQAGYAANPNTAPGYANPKSVSPQPGYGGQYDSAQYAHH
NT seq
2289 nt
NT seq
+upstream
nt +downstream
nt
atggcggattccggagtggagatggcggccgctggagaagtagaagaagagattaagacc
tcgggggaagaggaagcgatgcaagtcaatgaatctgaggctgcggcggacgagatcgta
gctgccgccggaaaccacaagcgaaagcatgaggatctggagccctctgacgacgctgaa
gacgcaccggccaagaaacaagaggtctcaaccgagaccctcgccgtagccgacgtcgag
acaagatccggcaacggagaggtcgctgaggatgcctcggtggaagattctgatgaggta
aaagcggaccttgtagcaaacgctgaccaaaatctagaagtgtctgaggttgttgaagtg
aaaactgatgaccaggttgaacaacaacttgctggaaccgatggcttggtgcctgtcgag
actgacaaagagataaaagaatcagaaacagaaacggatgaaaatggtaatattccttct
gaaaaagatcccgagagcttcgcatcacctccaatagattcagaagttgtatctcataaa
attgaaattcccaacaacaaggttggagttcttattgggaaagctggtgagacaataagg
taccttcagttcaactcgggagctaaaattcagataaccagagatgctgaagctgatcca
aattctacaactcgttccgtggaattaataggggccttcgaaagcattaacaaggcagaa
aaactcataaaagatgttattgctgaggctgatgctggtggttcaccatccctggtggct
agaggttttggaactttacagtctggtggagaacaatttgaaattaaagtagcgaatgag
aaggttgggttaatcataggcaagggtggagagactattaaaaatttacagaccagatct
ggcgctcgcatacagttgataccacaacatcttcctgagggtgatccttcaaaggaaaga
attgttcgaataactggagataaaagacaaattgaatctgctaaagaaatgatcaaggac
gtaatgaatcagacacctagggcatcacatctctctagtcacagccaacaaaactaccgg
gctcgtgggtcaaacttacagccccactggacagctcgagcaacttccccagcacaacgt
ggaggtcatgattaccagcaacgaggttcatatccacctcaatctgcacattatccccaa
ccttatggtggctactcacaacagtctgctccacgaggtggatttggcaatgctggttgg
gatcagagatcatctgcgcctgcccataatgctccaactagtgtgtatgactattatggg
aatggttgcccgccatctggagctcaagcttcaatggccaaccccatgtctggtccatct
ccagcgcctatgaactatgggcaatcacaacctccaaattatggacattctgctccctat
ggacagcctactcccatgcaacagaactataatcagagttacaatgaccccagatacgat
agtcaagcaccaaatcagcagttctataaccagcaatcaatgggcccgcaaccaaatgcc
tatggccaaggaacaacgcatacaggctacactcagcaaccaccgtataacaaggcagct
tatggtgcatcccaagagggaccttacggtgttccacatcaagaggggccgccatcttat
ggcgtgccaccgcgagcaagtcaacctggagatccaacataccagggttatggaccgcca
tcttatggatctggtgctcagcaatatccttacggttccaatgcagcttctcaaccggca
cctgcttataatcagacttatgggcctgcatctggagctactgatggatacgcccaacca
ccacaggcagtttatactcagcaggggggacaagctcctggctatggacaagctggacag
caagcatctgcatactctcagccaagttcccagccttctgcttatgggcagtaccccaca
ccccaacaaggctatgctgacccttcctcaggcaatacaaattatggatatcatggtggc
cctgctcaagcagcctatggtaataacatcccagcatcgggttatgctagtgctcctgct
gccggtagtcaacctggttatgctcagcagccatcaaatccttctggttattatgaccag
actatggctcctcaggctggatatgcggccaatccaaataccgcaccaggctatgcaaat
cctaagagcgtctcccctcaacctggatatggtggtcagtatgattctgctcaatatgct
catcactga
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