Zingiber officinale (ginger): 122002776
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Entry
122002776 CDS
T08725
Name
(RefSeq) serine/threonine protein phosphatase 2A 57 kDa regulatory subunit B' alpha isoform-like
KO
K11584
serine/threonine-protein phosphatase 2A regulatory subunit B'
Organism
zof
Zingiber officinale (ginger)
Pathway
zof03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
122002776
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
zof01009
]
122002776
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
zof03019
]
122002776
03036 Chromosome and associated proteins [BR:
zof03036
]
122002776
Protein phosphatases and associated proteins [BR:
zof01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
122002776
Messenger RNA biogenesis [BR:
zof03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
122002776
Chromosome and associated proteins [BR:
zof03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
122002776
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
B56
Rsd_AlgQ
PDGF
Ku_PK_bind
Motif
Other DBs
NCBI-GeneID:
122002776
NCBI-ProteinID:
XP_042414021
LinkDB
All DBs
Position
7A:137559495..137561394
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AA seq
452 aa
AA seq
DB search
MGFFGPRHAVKSPPLPQRKSTTLRRLFDLDSQIDALSPYPPAAPSADAETKQLLSAISYC
TTAVFNFVDPAESPAQQDLKRRQLSHVLSAVREIKALPFLDEAVWKPLLAMLAANLFRPL
PPPAHPCLPPDLLDEDGGGYAMALAPDWPHLHIAYDILSTAVAEADERTLRRHIDRGFLR
GLVSLFQSEDPRERDRLKVVYHQLYSKLAPDRGFMRRQMVCALAHQVFDAEPRPFGTAEL
LEIWGSIICGFAVPLKEEHRVFLSRILVPLHKAKCVGAYHRQLAYCVTQFVAKEPELGEV
VAKGILRHWPSTNCHKEVLLLEELEELVESSDVGDLQKVAVPICNRVARCSGSTNSQVAE
RALCMWNNEQFVKMASRCWEQVLPAIVESVEKNIEWHWSKSVQELATSLKRMLEEVEPAL
YSRFLLQLQRKEADMAEEERKRKMRWERLEMA
NT seq
1359 nt
NT seq
+upstream
nt +downstream
nt
atgggctttttcggcccgaggcacgccgtaaagtcgcctcctttaccccagcggaagtcc
accacccttcggcggctcttcgacctcgactcccaaatcgacgccctgtcgccgtaccct
cccgccgctccctccgctgatgcagagaccaaacagcttctttccgccatttcctactgc
accaccgccgtgttcaacttcgtcgaccctgctgagtcgccggcgcagcaggacctcaag
cgacggcagctgtcgcacgtcctcagcgccgtccgggagataaaggcgcttcctttcctc
gacgaagctgtctggaagccgctcctcgccatgctcgccgccaacctcttccgcccgctc
cctccgccggcgcacccctgtttgccgccggacctcctcgacgaggacggcggcggctac
gcgatggcgctcgctcccgattggccccacctccacatcgcgtacgacatcctctccacg
gccgtggccgaggccgacgagcggacgctccgccgccacatcgaccgcgggttcctccgc
ggcctcgtctcgctgttccagtcggaggacccgcgggagcgagaccggctcaaggtggtg
taccaccagctgtactcgaagctggccccggaccgcgggttcatgcggaggcagatggtg
tgcgcgctcgcgcaccaggtgttcgacgcggagccgcggcccttcgggacggcggagctg
ctagagatctggggcagcatcatctgcggcttcgccgtgccgctcaaggaggagcaccgc
gtgttcctaagccgcattctggtgccactgcacaaggccaagtgcgtcggcgcgtaccac
cggcagctggcctactgcgtgacccaatttgtggccaaggagccggagctgggggaggtg
gtagcgaaggggatcctacggcattggccgtccaccaactgccacaaggaggtgctgctg
ctggaagagctggaggagctggtggagtcgtcggacgtcggcgacttgcagaaggtggcc
gtgccaatctgcaaccgtgtagcccgctgctccggcagcacaaactctcaggtggcagag
agagctctgtgcatgtggaacaatgagcaattcgtgaagatggcgtcgcggtgctgggag
caagttctcccggccatcgtggaatccgtggagaagaacatcgagtggcactggagcaaa
tcggtgcaggagttggccacctcgctgaagaggatgctggaggaggtggagccggcgctg
tactcgaggtttctgctgcagcttcaacgcaaggaggcagacatggcggaggaggagagg
aagaggaagatgaggtgggagagactagagatggcttag
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