Zingiber officinale (ginger): 122002783
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Entry
122002783 CDS
T08725
Name
(RefSeq) U-box domain-containing protein 12-like
KO
K27628
U-box domain-containing protein 12/13/14 [EC:
2.3.2.27
]
Organism
zof
Zingiber officinale (ginger)
Pathway
zof04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
122002783
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
zof04121
]
122002783
Enzymes [BR:
zof01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
122002783
Ubiquitin system [BR:
zof04121
]
Ubiquitin ligases (E3)
U-box type E3
122002783
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Arm
U-box
ARM_ARMC5
HEAT_2
HEAT_EZ
ARMC9_ARM
HEAT
Cnd1
TPR_Trm732_C
Arm_2
zf-Nse
KAP
MLKL_N
Ric8
zf-RING_UBOX
PPP2R1A-like_HEAT
zf-C3HC4_4
TOR1L1_N
GP46
Motif
Other DBs
NCBI-GeneID:
122002783
NCBI-ProteinID:
XP_042414035
LinkDB
All DBs
Position
7A:137818060..137822388
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AA seq
636 aa
AA seq
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MAPTSEEEDAEVASGEAVDALLAVVSEVSALPEIRGPLSRMCCDLARRVKLLLPLFDELR
DDPDSIGLTELRSLESLCATIVEAKDALRLVNEGSKIYQVLRREKFERLFLKVTESIEKA
LDAINLDRLNISIEVKEQTELVQAQLHRARGSMESHDLLSRDLNLALHENHTDPIVLKRI
SEKLQLKNKSDIMKESLSLHEMVTSSDGELDVSVEQMSSLLKKLKDCVLENSGSASIETT
ASFAKHIPPVIPDDFRCPISLELMKDPVIVSTGQTYERSYIQKWLESGHKTCPKTQQPLT
HSTLTPNFVLKSLIAQWCDANGIELPQKQGSFQDNKLGNSSDCNHSGIAILLRKMVKGNQ
EEQRAAAGELRLLAKRNADNRICIAEAGAIPLLIQLLSSTDPRTQEHAVTALLNLSINED
NKSLIVKANALPKIVEVLESESMEARENAAAALFSLSVIDQNKILIGEAGAIPVLINLLC
RGSPRGKKDAATALFNLCLYQGNKVIAVKAGIVGHLRRMLVDATGGMVDEALAILTILAS
SQEGKVAITNSELIPLLLKLMKTGSARVRENAAALLFSLCNGDELQLRAVKGLGAEEALK
DLSETGTERAKRKAGSLLGLIHQITEVSGGDSSAKL
NT seq
1911 nt
NT seq
+upstream
nt +downstream
nt
atggcgccgacatccgaggaggaggacgccgaggtagccagcggcgaggcggtcgatgcc
ctcttggcggtagtgtcggaggtgtccgcgttgccagaaatccgcggcccgttgagtcgg
atgtgctgcgacctcgcgcggcgggtgaagctgctcctcccgctattcgacgagctgagg
gacgaccctgattccataggactcaccgagctccgcagcctcgaatccctctgcgccacc
atcgtcgaagctaaagacgcccttcgattagtcaacgaagggagcaagatctaccaggtt
ttacgacgagagaagttcgaaagacttttccttaaggtgactgagtctatagagaaagca
ctcgatgcgattaacttggatagacttaacatatccattgaagttaaagagcagactgaa
cttgttcaagcccaacttcatagagcaagaggtagcatggaatcacatgatttactatcc
agagatttgaatttggcactgcatgaaaatcacactgatcctatcgtcctcaaaagaata
tcagaaaagcttcaactcaaaaataaatctgatatcatgaaggagtctctttctctccat
gaaatggtgacttcaagcgatggggagcttgatgtttcagtggagcaaatgtcatcattg
cttaagaaactaaaagattgcgtgctggaaaattctgggtcagctagcatagaaacgaca
gctagttttgcaaagcatattcctcctgtgattccagatgattttcggtgtccaatttcc
cttgagctgatgaaggatcctgttatcgtttccacaggacaaacatatgaaagatcatac
attcagaaatggcttgaaagtggacataagacctgccctaagactcaacaacctctcacc
cactctactctcacacccaatttcgttttgaagagtttaattgcacaatggtgtgatgcc
aatggcatcgaactgccccaaaaacaaggtagtttccaggacaataagcttggaaatagc
tcggactgtaaccattctgggattgctatactacttcgtaaaatggttaaaggaaaccaa
gaagagcaaagagctgccgctggtgaactccgactacttgctaagagaaatgctgacaac
agaatatgcattgccgaagctggtgcaatccctttacttatacaacttctctcatccaca
gatcccagaacacaggaacatgctgttacagccctcctcaacctttcaataaatgaggat
aacaagagtctcattgtcaaagcaaatgcattgccaaagatagtagaggttctcgagagc
gagagcatggaggcgagggagaatgctgcagctgcactgtttagtttgtcagtaattgat
caaaacaaaatcctgataggagaagccggagccatacctgtgctcatcaatctgctgtgc
cgaggtagtccaagaggtaaaaaagatgcagcgactgcacttttcaatctctgcctttat
caaggcaacaaggtaattgctgtcaaagctggcattgtgggccatttgagaaggatgtta
gttgatgctactgggggtatggtcgatgaagcacttgccatattgacaattcttgcaagt
agtcaggaaggcaaggtggcaatcacaaattcagaactgattccactcctgttgaagctt
atgaagactggatcagccagggttcgggagaatgctgctgcattgcttttctcattgtgc
aatggcgacgagctgcaactcagagctgtaaaagggctgggtgctgaagaggcattgaag
gatctttccgagaccggcactgaaagggccaagaggaaagctggaagcctcttggggctg
attcaccagatcactgaggtttcaggcggggacagttctgctaaattgtga
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