Zingiber officinale (ginger): 122002801
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Entry
122002801 CDS
T08725
Name
(RefSeq) clustered mitochondria protein-like
KO
K03255
protein TIF31
Organism
zof
Zingiber officinale (ginger)
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03012 Translation factors [BR:
zof03012
]
122002801
Translation factors [BR:
zof03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
122002801
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CLU
eIF3_p135
TPR_12
TPR_10
TPR_NPHP3
CLU_N
TPR_2
GSKIP_dom
TPR_1
TPR_MalT
TPR_7
Motif
Other DBs
NCBI-GeneID:
122002801
NCBI-ProteinID:
XP_042414071
LinkDB
All DBs
Position
7A:138076975..138102795
Genome browser
AA seq
1434 aa
AA seq
DB search
MAGKSNRGKNKGRALNSNSVKASETQLKPNESLTPSNNVSDSVRASHDDEHVVEELVSKS
IAVPESGGNGESTNSQTVATAKQAEGDIHLYPVQVKALSGEKLELQLSPGDSVMDVRQFL
LDAPETCFFTCYDLILHTRDGTSHYLEDYNEISEVADITSGGCSIEMVAALYDDRSIRSH
VGRARELLSLSSFQTSLSTHLALQHESTQQKTADAAKMESAEQDGLGFMEDNNDALSDLV
FSVPSKEIKCVESIVFSTFNPPPCYRRLVGDLIYMDVVSLEGNKYCITGTTRSFYVNSST
NILDPKPSKPAYEASTLVGLLQKISSKFKKGLREILDQKASAHPFEGVQSLLPPNTWLGS
FPIPEHKRDPARAEEALTLSFGSELIGMQRDWNEELQSCREFPHKTLQERILRGRALYKV
TCDFVDAAVKGAMGVINRCIPPINPTDPECFHMYVHNNIFFSFAVDSDLGHVTKSQEILK
FNSQTVAENSTDQTSCNSLTRTFDNKLGGATTNCNLVTSKSSDVVQNPGASDISTDASAE
AQISDSEQATHASANNDLKGTKAYQEADVSGLHNLAMAIVDYRGYRVVAQSIIPGILQGD
KSNSLVYGSVDNGKKISWNDSFHAKVVEAAKRLHLKEHSVLDGSGNAIKLAAPVECKGIV
GSDDRRYLLDLMRVTPRDANYIGPEYRFCVLRPELVASFCQVEAAERSSSSSGNTAQAAE
APNDPDTIRTDITVGTGDHLKEEECTLAPVSHSISPDEILLNPNVFTEFILAGNQEEIVA
DEALVRKASTYLVDIVLPKFVEDLCSLDVSPMDGQTLADTLHAHGINIRYLGKVANMVKH
LPHLLDICSLEIIVRSTKHFLKDLLRESEDHDLGLAISHFFNCFIGNVLPVGSKGNLDNV
QLKVQKKGLDHHSKHKYMKGQMRWNHGDFSRKNQLAHALLTSEGLWSQIKEFAQFKYQFE
LPEDARIRVKKIAVIRNLCQKVGITIAARRCDFDAPSPFQASDILNLQTVVKHSVPSCSE
AKDLMESGKAKLAEGLLNEAYTLFSEAFSILQQVTGPLHRDVASCCRYLAMVLYHAGDMA
GAIVQQHKELIINERCLGLDHPDTAHSYGNMALFYHGLNQTELALRHMSRTLRILSLSSG
SDHPDVAATFINVAMMYQDIGNMKSALRYLQEALKKNERLLGPDHIQTAVCYHALAIAFN
CMGAYKLSIQHESKTHDILVKQLGEEDPRTRDSENWIKTFKLREQQVNAQKQKGQAVDPA
SALKAIDVLKANPELVQAFQAAAKSGNSSNLVNKSLNAAVIGEALPRGRGVDERAARAVA
EARKRAAARGILVRPSAAPMQPLPSLSQLVNIINSSTATDTPATVQPQSNEAEASHAQPN
EPKEAANGVPIHDSSTRSPNSNGSVSKDQAPVGLGTSLASQESKKQKHKSKSTV
NT seq
4305 nt
NT seq
+upstream
nt +downstream
nt
atggctggaaagtccaacaggggtaagaacaagggccgagcactgaattctaattctgtc
aaggcatcagaaacacaactaaaaccaaatgagtccttgacaccctcaaacaatgtttct
gattcggtgagagcttctcatgatgacgaacacgtggtagaagagttagttagtaaatct
attgcagtacccgagagtggaggcaatggggaaagcacaaatagtcagacagtagcaaca
gccaaacaggctgaaggcgatattcatctctatcctgtccaggtcaaagcactttcaggt
gaaaaactggagttacagctaagccctggtgattctgtgatggatgtcagacaatttctt
cttgatgctcctgaaacttgtttctttacttgctatgatttgattctgcatactagagat
gggacatctcattatttagaagattacaatgaaatttctgaagttgcagacattacttct
ggtggttgctccatagagatggttgctgcattatatgatgatagatccattagatctcat
gtgggccgggccagagaattgctctctctttctagttttcaaacctctctgtcaacacat
ctggctttgcagcatgaaagcactcaacaaaaaactgcagatgctgcaaaaatggaatct
gcagagcaggatggattgggatttatggaggataacaatgatgctctttctgatttggtc
ttttcagtgccttctaaggagattaaatgtgtcgagagcatagtgttttctacttttaat
ccacctccatgttacaggagattagttggagatctgatctatatggatgtagtgtcacta
gaaggaaacaaatattgtatcacaggaaccactagaagtttctatgtgaattctagcaca
aatattttggaccccaaaccatctaaacctgcttatgaggcaagcactctagttggtttg
ctgcaaaagatcagttccaagttcaagaaaggtcttcgtgaaattttggaccagaaagca
tctgctcatccttttgaaggtgttcaatcacttttgcccccaaatacatggctaggatcc
tttcctattccagagcataaaagagacccagcaagagcagaggaggctcttaccctttca
tttgggagtgaacttattggtatgcagagagattggaatgaagagttgcagtcatgtcgg
gagtttcctcataaaacactgcaagaaaggatactgcggggaagagcgctttataaggta
acttgtgattttgttgatgcagcagtaaaaggtgcaatgggagtcatcaacagatgtatt
ccgcctattaacccaacagatcctgagtgtttccatatgtatgtgcataacaacattttc
tttagtttcgctgtggattctgaccttggacatgttaccaaaagtcaagagattcttaag
tttaactctcaaactgttgctgagaactccaccgatcaaacttcatgtaattctttgacg
aggacctttgataataagttgggtggggctactacaaactgcaatttggtcacgtccaag
agctcagatgtggtacaaaacccaggtgcttcagatatttcaactgatgcatctgctgag
gcacagatcagtgatagtgagcaggccacacatgcttctgcaaataacgatcttaaagga
acaaaagcctaccaagaagcagatgtttctggacttcataatcttgcaatggctattgtt
gattacagaggctatcgagtggtagcacagagcatcattcctggtattcttcaaggtgac
aaatcaaattccctggtatatggttctgttgataatggaaagaagatatcctggaatgac
tcatttcatgccaaggttgttgaggcagccaagcgcctccacttgaaagaacactctgtt
ttagatggatctggaaatgccatcaaattagccgctccagttgaatgcaagggtatcgta
ggtagtgatgacaggcgctatcttttggatttaatgagagtcactccgcgtgatgcaaat
tacattggccctgagtatcgtttttgtgtcttgaggcctgaacttgttgcatcattttgt
caggttgaagctgcagagaggtcaagctctagttctggaaatacagcacaagctgcagaa
gcaccaaatgacccagatacaattcgtactgatatcacagttggcacgggagatcactta
aaagaggaggaatgtacccttgcacctgttagtcatagtatttcacctgatgaaatactt
ctgaatccaaacgtgtttactgaatttatactggcaggcaaccaagaggaaattgttgca
gatgaagcattggtcaggaaagctagtacttatcttgttgatatagttcttccaaagttt
gttgaagatctttgctcgcttgatgtctcaccaatggatggtcaaacattagccgacaca
ctccatgctcatggaattaatatacgttaccttggaaaagttgctaatatggttaagcat
ttgccacatctattggatatatgctctcttgagattatcgttaggtccacaaagcacttt
ctaaaggatttactaagggaatctgaagatcatgaccttgggctggctatttctcatttc
tttaattgtttcattgggaatgttttacctgttggctcaaaggggaatttggacaatgtg
caattgaaagtccaaaagaaaggactggatcatcactcaaagcacaagtatatgaaggga
caaatgaggtggaaccatggagatttttctaggaaaaaccaactggcacatgcactttta
acttctgaaggactatggtctcaaattaaagagtttgctcaatttaaatatcagtttgaa
ttaccagaagatgcaaggattcgagtgaaaaagattgcagttattcgtaatttgtgccaa
aaggtagggatcacaattgctgcaagaaggtgtgattttgatgctccatcaccctttcaa
gcctcagatattttgaatctccaaacagtggtaaagcattctgttccatcatgttcagaa
gcaaaggatctaatggaatctgggaaagcaaagttagctgagggactcctcaatgaggct
tatacgcttttttcagaagccttctctatacttcaacaagtgactggccctttgcaccga
gatgtcgctagctgctgtcggtatttggcaatggttttatatcatgctggcgatatggca
ggtgcaatcgtccaacagcacaaggaactgattataaatgagcgatgccttggtctagat
caccctgatactgcccatagctatggcaacatggcactcttttatcatggacttaaccag
acagaactcgcgttgcgtcatatgtcccgaacgctgcgaatactaagtttatcatcgggg
tctgatcaccctgatgttgcagcaaccttcataaatgttgctatgatgtaccaggatatt
gggaacatgaaatctgcactacggtatttgcaagaagcattgaaaaagaatgaacggctt
ctcggtcctgatcatattcaaaccgcagtctgttatcatgctcttgcaattgcatttaac
tgtatgggtgcctacaaactttctattcagcatgaaagcaaaactcatgatatacttgtt
aagcaactcggagaggaagatcccaggacacgggattcagaaaattggataaagacattt
aaattacgtgagcagcaggtgaatgcacaaaagcaaaagggacaagctgtggatccagct
tctgccttaaaggctattgatgttttgaaggcaaatcctgagctggtacaagcattccaa
gctgcagccaaatctgggaattccagcaatttggtaaacaaatctctaaatgcagctgtg
attggtgaggcacttcctcgtggaagaggagttgatgagagagccgctcgagctgttgca
gaagcacgcaagagagctgcagccagaggcatcctcgtacgcccgagcgcggctcctatg
caaccattaccctcattatcgcaacttgtgaacatcataaattcaagcactgctaccgat
acccctgctactgtccaaccgcaatcaaacgaagctgaagcaagccatgcacaaccaaat
gaacccaaggaggcagccaatggtgtccccattcatgacagttccacgagatctcccaat
tcaaatggttcggtcagcaaggatcaagcgccagttggattggggacgtcgctggcctct
caagaatcaaagaaacaaaaacacaaatccaaatcaacagtatga
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