Zingiber officinale (ginger): 122002831
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Entry
122002831 CDS
T08725
Name
(RefSeq) structural maintenance of chromosomes protein 4-like
KO
K06675
structural maintenance of chromosome 4
Organism
zof
Zingiber officinale (ginger)
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
zof03036
]
122002831
Chromosome and associated proteins [BR:
zof03036
]
Eukaryotic type
Chromosome condensation proteins
Condensin I
122002831
Condensin II
122002831
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMC_N
SMC_hinge
AAA_21
AAA_23
AAA_15
AAA_29
KIF21A
Trimer_CC
FlaC_arch
ABC_tran
Motif
Other DBs
NCBI-GeneID:
122002831
NCBI-ProteinID:
XP_042414113
LinkDB
All DBs
Position
7A:138862720..138881583
Genome browser
AA seq
1239 aa
AA seq
DB search
MESETGAGGTHTPPSTRRARLVITEMVLRNFKSYAGEQRIGPFHKSFSAVVGPNGSGKSN
VIDAMLFVFGKRAKQMRLNKVSELIHISSNHQNLESAGVSVHFQEIIDLDDGTFEAVAGS
DFIITRVAFRDNASKYYINDRGSNFTEVTKKLKGKGVDLDNNRFLILQGEVEQISLMKPK
AQGPHDEGFLEYLEDIIGTNQYVEKIEETYKQLEALNEKRSAAIQMVKLAEKERDTLEDV
KNEAEAFMLKELSLLKWQEKATKLAFDDASSHVSELQEKLSNLEENHAAEREKIQQNLRT
LKELESVYDKYLKRQEELDTDMRSCKEQFKEFERQDVKHQEDLKHKKQKIKKLEDKLGKD
SAKIDELASQHERSSDLIPKLEEEVPKLQHQLQEEEITLEKIKETSRGETEMYRSELMEV
RAELEPWENQLIEHRGSLDVASAESKLLREKHDAGRKAFEDAKHQIDEIVENIKIKNELI
AEVKNKLAQKKLEKSEARKLEQECIKEQESLICLEQAARQKLTEMKSTLESEKSHGSVLK
AILQAKETKEIEGIYGRLGDLGSIDAKYDIAISTACPGLDYIVVETTAVAQACVELLRRK
NLGIATFMILERQLDQLRKLKDKVKTPEGVPRLFDLVAVKDEKLKLAFFAALGNTVVAKD
LDQATRIAYGGDKDFRRVVTLEGALFEKSGTMSGGGNKPRGGKMGRYIRESVSREDVVSC
EKDLAQLVDQLSDIRHRIADCTRRFQACEKDEAHYEMELAKTQKEIDSLNEQHNYIKSQL
VALKAASQPKKEELNRLKELDGIISAEQSEIEKLVKCSSTLKERASELQKKIENVGGELL
KNQKSKVAKIQEGIDKTCSDINRHKVNIASGQKMTEKLKKGIEDTKTEKEKLVLEKENML
IIFKEIEQKAFVVQENYKKTQELIDKHKVVLEETKNEYNKLKKTMDELRAAEVDADFKLQ
DAKKLKKEWEIKAKALRKKLDDNQSELVKQMDLMKSDALDAEKIQAILSDEALQNPCDMR
RAMEMVTLLEAQLKDMNPNLDSIAEYHKKVLVYNERVEELNAVKQECDEVKKHYDELKKR
RLDEFMAGFNIISLKLKEMYQMITLGGDAELELVDSLDPFSEGVVFSVRPPKKSWKNIAN
LSGGEKTLSSLALVFALHHYKPTPLYVMDEIDAALDFKNVSIVGHYVKDRTKDAQFIIIS
LRNNMFELADRLVGIYKTDNCTKSITINPGSFVNCGNAA
NT seq
3720 nt
NT seq
+upstream
nt +downstream
nt
atggagtctgagacaggcgccggaggcactcacactcctccctcgacgaggagggcgcgt
ctcgtcatcacggaaatggtgctgcgcaacttcaaatcctacgccggcgagcagcggatc
ggccctttccacaagagtttttcggcagttgtcggtccaaatgggagcggaaaaagtaac
gtcatagatgcgatgctttttgtgtttgggaagcgggcgaaacagatgcgcctaaataaa
gtgtcggagctgatacatatctccagcaaccaccagaatctggaaagtgctggagtttcg
gttcactttcaagaaattattgacctggatgatggaacctttgaggctgtagctggaagt
gatttcatcattacaagagttgcgtttagggataatgcttcaaaatattacattaatgac
cgtggaagtaatttcactgaggtcaccaaaaagctgaagggaaaaggagtggacttggat
aataaccgatttctaatcctacagggtgaagtcgaacagatctcacttatgaaaccaaag
gctcaagggcctcatgatgaaggattccttgaatatcttgaggatattattggaacaaat
cagtacgtggagaagattgaagaaacctacaagcagcttgaggccctcaatgaaaaacgg
tctgcagcaattcagatggtaaaactagctgaaaaggaaagagacactttggaggatgtt
aaaaatgaagcagaagcatttatgttgaaggaattgtcacttctaaaatggcaagagaaa
gcaactaaacttgcgtttgatgatgcttcttcccatgtttctgagttgcaggagaaattg
tcaaatttggaagaaaaccatgcagctgaaagggaaaaaatccaacagaatttgaggacg
ttgaaggagttagagtctgtgtatgataaatacttaaaaagacaagaggaacttgatact
gacatgaggtcatgcaaagaacaatttaaagagtttgagcggcaggatgtaaagcaccag
gaagatttaaagcacaagaaacaaaaaataaaaaaactggaagacaagctagggaaggat
tcggcaaaaattgatgaactggcaagccagcatgaaagatcgtcagacctaatacccaaa
cttgaagaagaagtgcctaaactgcaacatcagctacaggaagaggaaattaccttagaa
aaaattaaagaaacctccagaggtgaaactgagatgtaccggtctgagctcatggaggtc
cgtgcagaactggaaccatgggaaaaccaactaattgagcacagaggatccttagatgtt
gcaagtgctgaaagcaaacttttgagagaaaagcatgatgctggtcggaaagcatttgag
gatgccaaacatcagattgatgaaatagtggagaatatcaaaattaaaaatgaattaatt
gctgaagttaaaaataagctagctcaaaaaaagcttgaaaaatcggaagcacgaaagttg
gaacaggaatgcattaaggaacaagaatcccttatttgtcttgagcaagcagcaaggcag
aaactgacagaaatgaaatctactttggaatcagaaaagagtcatggttcggtcctgaaa
gccatattgcaagcgaaagagacaaaagaaatagaaggaatttatggtcgtttgggtgat
ttaggttcaattgatgcaaaatatgacattgccatatccactgcatgtcctggactagat
tatatagtggtcgagactactgcagtagcacaagcgtgcgttgagttgcttcgcaggaaa
aatcttggcattgccactttcatgattttggaaagacaattagatcaactcaggaagctg
aaggataaagttaaaactcctgaaggagttcctcgcctttttgatcttgttgctgtaaaa
gatgaaaagcttaaattagcgttttttgctgcacttggaaatactgttgtggcaaaagac
cttgatcaggctactaggattgcatatggaggggataaagacttccgccgtgttgtgaca
ttggaaggtgcactatttgagaagtcaggtacaatgagtggtggcggcaacaagccccga
ggcgggaagatgggtagatacattagggaaagtgtttctagagaagatgttgtaagttgc
gagaaggaccttgctcagctggttgaccaactcagtgacatacgccacaggattgctgat
tgcactagacgctttcaagcttgtgaaaaggatgaagcccattatgaaatggaactagct
aagacacaaaaggagattgatagtttgaatgaacaacataattacataaaaagtcagctt
gtggcattgaaggctgcatcccaaccaaagaaagaggaactgaaccggttgaaggagttg
gatggtatcatatctgctgagcaaagtgaaatagagaagcttgttaaatgctctagtacg
cttaaggagagagcttctgagcttcagaagaaaatagaaaatgtcggtggcgagttgttg
aaaaatcagaagtcaaaagttgcaaagattcaagaaggtattgataaaacctgcagtgac
attaatcgacacaaagttaacatagcttcaggccagaaaatgacagaaaagttgaaaaag
ggtattgaggatacaaagacagagaaagaaaaacttgtcctggagaaggaaaacatgtta
attattttcaaagaaatagaacaaaaggcatttgttgtccaagaaaactataaaaagact
caagagctcattgacaagcacaaggttgttcttgaggaaacaaaaaatgaatacaataaa
ttaaagaaaactatggatgagctacgagctgcagaggttgatgctgattttaagttgcaa
gatgcaaaaaaacttaaaaaggaatgggagataaaggccaaggctttaagaaaaaaactt
gatgacaaccaatcagaacttgttaagcagatggatttaatgaaaagtgatgcattggat
gctgaaaagattcaagccattttatcagatgaggcactccaaaatccttgtgatatgaga
agagcaatggaaatggtgaccttgctagaagctcagctgaaggacatgaatcccaacctg
gattcaattgcagaatatcataaaaaagttttggtctacaatgaacgggtggaagaacta
aatgctgttaaacaagaatgtgatgaagtgaagaagcattacgatgagttgaaaaagaga
aggctagatgagttcatggcaggattcaacataatatctctaaagttgaaggagatgtat
cagatgatcacacttggaggtgatgcagaacttgaattagttgattctctggatcctttt
tcagaaggtgtggttttcagtgtaagacctccaaagaagagctggaagaatattgctaat
ctgtctggtggtgagaagacacttagctcattggcccttgtatttgctctccaccactac
aagcccaccccactctatgttatggatgagattgatgcggcgcttgacttcaaaaatgta
tcgattgtgggacactatgtgaaagaccggactaaagatgcccaatttattatcattagt
cttcggaataacatgttcgaacttgctgatcggcttgttggcatttacaaaaccgataat
tgcacaaaaagcataactattaaccctggaagttttgtaaactgtggcaacgctgcttaa
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