KEGG   Zingiber officinale (ginger): 122002844
Entry
122002844         CDS       T08725                                 
Name
(RefSeq) heterogeneous nuclear ribonucleoprotein A2 homolog 1-like
  KO
K12741  heterogeneous nuclear ribonucleoprotein A1/A3
Organism
zof  Zingiber officinale (ginger)
Pathway
zof03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:zof00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    122002844
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:zof03019]
    122002844
   03041 Spliceosome [BR:zof03041]
    122002844
Messenger RNA biogenesis [BR:zof03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Other transport factors
     122002844
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     122002844
Spliceosome [BR:zof03041]
 Common components
  Common spliceosomal components
   hnRNP proteins
    122002844
SSDB
Motif
Pfam: RRM_1 RRM_7 RRM_PARP14_3 RRM_Nup35 BRAP2 Spo7_2_N
Other DBs
NCBI-GeneID: 122002844
NCBI-ProteinID: XP_042414130
LinkDB
Position
7A:complement(139007291..139012635)
AA seq 339 aa
MGSRMQEHDGASPAKIFIGGLPKDTTLDAFVKHFEEYGEIVDSVIMKDRSTNKPRGFGFI
TYRDASVVDKVIEESHVFNGKMVEIKRTIPKGAAPLKDFKTRKIFVGGIPTTLSEDQLRN
FFSEFGKVQDLEIIRDHTTNRSRGFGFVVFEKEKDVDDLLAKKGNMIDLAGTKVEIKKAE
PKKPGNPPPAFGSGSRSRHFGDNASSYGGSYSSVGGAGGYGPPPTFRTPGGFGPRPGGYG
GYGSAPGEYSGGYGGYAGDYRGEPSIGYSSRFGSYGGGFSSGYGGSLGGYGREAPGYGGS
SYGGGYDSPGSYGSGLYGSRGGYGSGGGAGPGRYHPYGR
NT seq 1020 nt   +upstreamnt  +downstreamnt
atgggctcgaggatgcaggagcatgatggtgcgagccctgcaaagatcttcatcggaggg
ttaccgaaggatacgacgctcgatgcatttgttaaacactttgaggagtatggagagata
gtagattcagtgataatgaaagatcggagtacaaacaagccaagaggctttgggtttatc
acctatagagatgcttctgttgttgacaaagttattgaggagtcacatgtgtttaatgga
aaaatggtggaaataaaaagaactattccaaaaggtgctgctcccttgaaggattttaag
acgaggaagatattcgtaggtggaataccaactactctctcagaagatcaactcaggaac
ttcttttctgagtttgggaaggtgcaagatcttgaaatcattagggatcatacaaccaac
cgttctcgtggatttggttttgtagtctttgagaaagaaaaagatgtagatgatctgtta
gcaaaaaaaggaaatatgattgatctagctggcactaaggttgaaatcaagaaggctgag
ccaaagaaacctggcaatcctccgcctgcttttggcagtggatctaggtctcgtcatttt
ggcgataatgccagcagctatggtggttcatacagcagcgttggtggtgctggtggctat
ggccctcctcccacctttcggacaccaggtgggtttggtcctagacctggtggttacggt
ggttatggaagtgctcctggtgaatacagtggtggttatggtggttatgctggagactac
cggggagaaccctccataggatactctagccgttttggttcctatggtggaggatttagc
agtgggtatggtggcagtttaggtgggtatggtcgtgaagctccaggttatggtggctct
agctatggagggggttatgattcaccaggaagctatgggtcaggactatatggtagcagg
ggaggctatggcagcggcggtggggctggtcctggtcgttatcacccctatggaagatag

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