Zingiber officinale (ginger): 122002913
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Entry
122002913 CDS
T08725
Name
(RefSeq) glutamate receptor 2.8-like isoform X1
KO
K05387
glutamate receptor, ionotropic, plant
Organism
zof
Zingiber officinale (ginger)
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
zof04040
]
122002913
Ion channels [BR:
zof04040
]
Ligand-gated channels
Glutamate (ionotropic)
122002913
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GFIT
Motif
Pfam:
ANF_receptor
Lig_chan
Peripla_BP_6
SBP_bac_3
Lig_chan-Glu_bd
Motif
Other DBs
NCBI-GeneID:
122002913
NCBI-ProteinID:
XP_042414237
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Position
7A:complement(140394424..140397892)
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AA seq
982 aa
AA seq
DB search
MKTPTLSYRCLAGFLLLFSFLRFLSAAHGPSEFKVGLILDMNSTVGKVCRIVAGMAHDDF
YAAHPASSARLRLLPRDSHRDVLDAAAAAMDLLVNEEVHAILGPQTSVESPFVADLGEYA
NVPVVSFSATSPAVSPSCNPFFVRAAASDAAQVAAIAALVQAFAWTSVVPVYEDSDYGTA
LLPVLADALDAVGAAVPYRCAVSLADSDDRISAELYRLKTLQTRVFVAHVTLRLARRLFP
LVRQAEMMAKGSVWIVTEGLTSQFATIVDSQHFLAEFLQGVIGVKPYVPWSPRLRRFNRR
WRREFLRENHESDITELNNFGIWAYDAVWAVAAAANRLGPAAASHDFRRPNTTPSSTDFS
RMGVSSTGPKLLNFIKTAEFEGLAGRFRLHDGELAVAAYQIVNVDGGSVREIGFWTEKHG
LSSDLNSTAGNKLRPVIWPGYSTSVPRGWETPTGGRRLQVVVPGSPNQTLQFQSFVSMKY
DSETNQTRASGFVIDVFEAAVRRLPYALPFDYIPYRNANGSGGGDYNALVKLVADQVYDA
VVGDVSITANRSLIVDFTLPFTVSGVSMVVPLRDGHSSTAWIFHKPLTADLWLTSVVFFI
FTGAVVWILEHRTNEEFQGTAGQQMGITFYFAFSTLVFAHRENLTSNLSRMVVIIWVFVV
LILQSSYTASLTSMLTVQKLNPTLSSFEELNKTGLRIGYLNNSFTKGLLLHLGFQESRLR
PFRSPEQYHQALADGSVAAIVDEVPYLRVFLRDYCNNYSMAEQIYKTSGFGFVSPSARRG
RSKVGEKMLMSVFCGALQVFRKGSPLVADLSRAILNLTEGNEMTEIERKWFGDQTTCPNQ
GSVLSPDTRSLNAKSFWGLFLITGAVSLLCCLFYSLRSVYRDRLSLTGVVSGRSFGRRLL
SIARLFDGQGNGDPPGAPRSGKRMEIGAATAGASPSSLQSSSDQESRTSTSDDSFTGSSS
PELGISQIHEAMPHPGEPEENH
NT seq
2949 nt
NT seq
+upstream
nt +downstream
nt
atgaaaactcctacactgtcttatcgctgcctcgccggcttcctcctcctcttctccttc
ctccgcttcctctccgccgcccacgggccgtcggagttcaaggtcggcctcatcctcgat
atgaattccaccgtcgggaaagtttgccgcatagtcgccggtatggcacacgacgacttc
tacgccgcccaccctgcgtcctccgcccgcctccgcctcctccctcgtgactcccaccgc
gacgtcctcgacgccgccgctgccgcgatggatttgctggtcaacgaggaggtccacgcc
atcctgggcccgcaaacctccgtcgagtcaccgtttgtcgccgacctcggcgaatacgct
aacgtccccgtcgtgtcgttttccgccaccagccccgcggtgtccccctcctgcaacccc
ttcttcgtccgcgccgccgcctccgacgccgcccaggtcgccgccatcgccgccctcgtc
caggccttcgcctggaccagcgttgtccccgtctacgaggactccgactacggcaccgcc
ctcctccccgtcctcgccgacgccctcgatgcggtcggcgccgccgtcccctaccgctgc
gccgtctctctcgccgactcagacgatcgcatctccgccgagctctaccggctcaagacg
ctccagacgcgagtcttcgtggcgcacgtcactctgcggctcgctcgccgccttttccct
ctcgtccggcaggcggagatgatggcgaagggctccgtgtggatcgtcactgaagggctc
accagccagttcgccaccatcgtcgattcgcagcacttcctcgccgagttcttgcagggc
gtgatcggagtgaagccatacgtgccatggtcgccccgcctccggcgatttaatcggcgg
tggaggagggagttcctgagggagaaccatgaatccgacatcacagagctcaacaacttt
ggaatttgggcctacgacgctgtgtgggcagtcgccgccgccgccaatcgccttggcccc
gccgccgcaagccacgatttccgcaggcccaacaccaccccgtcgagcacggacttctcc
aggatgggcgtctcaagcaccggccccaagttgttgaacttcatcaagacggcagagttc
gagggcctcgccggaagattccggctccatgacggggagctcgccgtggcggcgtaccag
atcgtgaacgtggacggggggagcgtgagggagatcggcttctggacggagaagcatggg
ctgagcagcgatctgaactcgaccgccgggaataagctgcgtccggtgatatggccgggt
tactcgacgtcagtgccccgtgggtgggagacgcccacgggcgggcggcgactgcaggtg
gtggtgccgggatcaccgaaccagacgctgcagttccagtcgttcgtgagcatgaagtac
gactcggagacgaaccagacgcgggcgagcgggttcgtgatcgacgtcttcgaggcggcg
gtgcggcgactcccttacgcgcttcccttcgattacataccttaccgtaacgccaacggc
tccggcggcggcgactacaacgcactcgtcaaactggtcgccgaccaggtatatgacgca
gtggtgggtgacgtgtccatcaccgcaaacaggtcgctgatcgtcgacttcacccttcct
ttcacggtctccggcgtgtccatggtcgtccctctccgggacgggcacagcagcaccgcg
tggatcttccacaagccgctcacggccgacctatggctgacaagcgtggtcttcttcatc
ttcaccggcgccgtcgtctggatcttggagcaccggacaaacgaggagttccagggcacc
gccggccaacagatgggcatcaccttctacttcgccttctccacgctcgtcttcgcccac
agggagaacttgacgagcaacctgtcgaggatggtggtgatcatctgggtcttcgtggtg
ctgatactgcagtccagttacacggcgagtctgacgtccatgctcacggtgcagaagctt
aatccgactctgagctccttcgaggagctcaacaagacagggctgaggatcgggtacctc
aacaactccttcacgaaggggctcctgctgcatctcggttttcaggaatcgagattgagg
ccgttccggtcgcctgagcagtaccaccaagctctggcagatggcagcgtggccgccatt
gtcgacgaggtcccgtacctgagagtgttcctgagggactactgcaacaactactccatg
gctgagcagatctacaagaccagcggatttggattcgtaagcccatctgctagacgtgga
agatccaaagtcggggagaagatgctgatgagcgtgttctgtggtgctttgcaggttttc
cggaaaggatctccgttggtggccgacctgtcgagggcgatacttaacctgaccgagggc
aacgagatgactgaaattgagaggaaatggtttggcgatcagacgacctgcccgaaccag
ggcagcgtactctcgccggacacccgcagcctcaacgcgaaaagcttctggggcctcttc
ctcatcaccggagctgtctcgttgctctgctgccttttctactcgttacgctcagtttac
cgtgacaggctctctcttaccggcgtcgtgtcagggaggtccttcgggaggaggcttctc
tccattgctcggctcttcgatggtcagggcaatggtgatcctccgggtgcaccaaggagt
ggcaagcggatggagatcggagcagccacagcaggtgcaagtccaagttctttgcagagt
tccagcgaccaggaaagccgaacgagcacctccgatgattcattcacaggaagctcttcg
ccggaactcggcatcagccagatacatgaagcaatgccacatcctggtgagcctgaagaa
aatcattga
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