Zingiber officinale (ginger): 122002920
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Entry
122002920 CDS
T08725
Name
(RefSeq) probable histone acetyltransferase HAC-like 1 isoform X1
KO
K04498
E1A/CREB-binding protein [EC:
2.3.1.48
]
Organism
zof
Zingiber officinale (ginger)
Pathway
zof03083
Polycomb repressive complex
zof03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
122002920
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
122002920
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
zof03000
]
122002920
03036 Chromosome and associated proteins [BR:
zof03036
]
122002920
03029 Mitochondrial biogenesis [BR:
zof03029
]
122002920
Enzymes [BR:
zof01000
]
2. Transferases
2.3 Acyltransferases
2.3.1 Transferring groups other than aminoacyl groups
2.3.1.48 histone acetyltransferase
122002920
Transcription factors [BR:
zof03000
]
Eukaryotic type
Other transcription factors
Pocket domain CBP
122002920
Chromosome and associated proteins [BR:
zof03036
]
Eukaryotic type
Histone modification proteins
HATs (histone acetyltransferases)
122002920
Mitochondrial biogenesis [BR:
zof03029
]
Mitochondrial quality control factors
Regulator of mitochondrial biogenesis
Coactivators
122002920
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HAT_KAT11
zf-TAZ
ZZ
PHD
KIX_2
GpA_ATPase
Motif
Other DBs
NCBI-GeneID:
122002920
NCBI-ProteinID:
XP_042414251
LinkDB
All DBs
Position
7A:140526419..140543001
Genome browser
AA seq
1694 aa
AA seq
DB search
MNAHAFSGQMANQMSSQMPVPPQQIGNYMSSQMQNLGPRPLDPELQEARKTMQQKIYNAL
LKRNQTSSEEWVRKLPEIVRRLEERIYKDTPTREDYLNLALEPIENRLSSIIKNVVSHSR
SLPHQNLPSSTASTMIPTPGISNNIGINASVSVQPENPTLTGINNAIAPQNTTNMGNFTS
YGLNDAGTVSSSYHQQSANYALGAGGRSMMPSVTPSNMSRQFPQMIPTPGFNNQHVAASS
ESCNVVGISNTDTAVAQHPLQQKKYIVNQNSHMLHQIGAGIRSNVIHQSSPYGISNGLAN
GTFGLVGNNGSATSEGFVGPPPYVSSLKPLQKNFDQQQHQLREPTSLSHQLSSIVDDVYN
SNAPNATSSETFPGPDSSVLSAMNNMNAVNLHPKLRTNSGLLNHHASLQSMRLPLNVRAQ
FLDQSEKLNYQSSQSTSENLLQSPQHAEQSSQQPSQAYPQYVPNQYQLLRRHQGSIQNQQ
LMPKTDSLRDSSVASHFAEQLIPGNAKIVYSDPLIQSSSAQDQSQTQYHQIGSSEDHAKS
VQFLGHLGSQGFHVSVSEDSQPLLHPNVQSDGFSDKFDHLSTGLQAEDLQFQWNSQPLHA
QMPDKLSCQQLEEELERTIRQDDPQRCDLSTRDVNSEHEDYINKQNYIKQVRWLLFIHHA
RRCPAPKGLCKEANCTKVQELVLHMDTCKNDHCNFPRCFQSRKLVGHIRNCKVLDCPVCI
PVRNHLAANYKAHAHALSGTAGETETQKVTETIKKDTMPTENFEDKEYLAKRLKVQNTTF
SPNNDFSRVQFSSGNQASDPQEAQSLEFKQTLPAISEVIVKMDESSGSRQDKKPTLSSTS
NGFVSSPNWKKDPIAKSVDVHVKQESMLVDNVPDQSVSNIQQDHENLQTDLVSGNKSGKP
KIKGVSLIELFTPEQIKEHIVGLRQWVGQSKAKAEKNQALERSMTENSCQLCAVEKLTFD
PPPIYCSPCGARIKRNAFYYTVGTGETRLYFCIPCYNEARGDTIEAEGSTFLKARLEKRR
NDEETEEWWVQCDKCESWQHQVCALFNGRRNDGEAEYTCPNCCVEEIEKGERKPLPETAV
LGAKDLPRTILSDHIEQRLFRQLKQERQERARQLGKSYDEVPGAEGLVVRVVSSVDKKLE
VKQRFLEIFQEENYPKEFPYKSKAILLFQKIEGVEVCLFGMYVQEFSSECSFPNQRRVYL
SYLDSVKYFRPEIKAVSGEALRTFVYHEILIGYLEYCKKRGFTSCYIWACPPLKGEDYIL
YCHPEIQKTPKSDKLREWYLTMLRKASKENIVVELINLYDHFFTTMGECKARVTAARLPY
FDGDYWPGAAEDMINQLRQEEDGRKQLKKGKTKKTITKRALKAAGQTDLSGNASKDALLM
QKLGETICPMKEDFIMVHLQYSCTHCCILMVSGTRWVCNQCKNFQLCDRCHEAELRIEER
DKHPPNSREKHLLYPVEINDVAYDTKDKDEILESEFFDTRQAFLSLCQGNHYQYDTLRRA
KHSSMMILYHLHNPAAPAFVTTCNVCHRDIESGLGWRCESCPDFDVCNDCYKKGGIDHPH
KLTNHPSMADRDAQNKEARAKRVLQLRKMLDLLVHASQCRSPQCQYPNCRKVKGLFRHGI
QCRTRASGGCVLCKKMWYLLQIHSRACKESECSVPRCRDLKEHLRRLQQQSDSRRRAAVM
EMMRQRAAEVAGST
NT seq
5085 nt
NT seq
+upstream
nt +downstream
nt
atgaatgcacatgccttctctgggcagatggctaaccagatgtctagccaaatgcctgtt
ccgccccagcagattggaaactatatgtcatcccagatgcagaatctcggacctagacca
ttggatcctgaacttcaggaggctcgaaaaaccatgcaacagaagatctataatgcactt
ctaaaaagaaaccaaacgtcttctgaagagtgggtacggaagttaccagaaattgttagg
cgtttggaggagcgtatatacaaggatactcccactagggaagattatttgaatttagct
ttagaaccaatcgaaaatcgtttatcatcaataatcaagaatgttgtcagtcacagtcga
tctttgccgcatcagaatttaccttcctcaactgctagcacaatgattccaactccgggc
atatccaacaatattggtattaatgcttctgtttcagttcaaccagagaaccctacactt
actggcatcaataatgctattgctcctcaaaatacaacaaacatgggaaattttacctca
tacggtcttaatgatgctggaacagtttcaagtagttaccatcaacaatctgccaattat
gctcttggtgcaggtggaagaagtatgatgccctcagtaacaccgagtaacatgtcaaga
caatttcctcagatgataccaactcctggatttaataatcaacatgtagctgccagttct
gagtcttgtaatgtagtcggaatttctaacactgacactgctgtggctcaacatccactc
cagcaaaaaaaatacatagtcaatcagaacagccatatgctgcatcaaattggtgctgga
ataaggtccaatgttattcaccagagttccccctatgggatctcaaatggacttgcaaat
ggtacatttggtttagttgggaacaatggctctgcaacatcagagggttttgtaggccca
cctccttatgttagttctttaaagcccctgcagaagaactttgatcagcaacaacaccaa
ctaagagagccaacatcattgtcacatcaactatcatctatcgttgatgatgtctacaac
tcaaatgcacctaatgctacatcctctgagacatttcctggacctgattcatctgtttta
tctgctatgaacaacatgaatgctgtaaatttgcatcctaagttaagaaccaactcaggt
ttgctaaatcatcatgctagtttacaatcaatgaggcttcctttgaatgtaagagcccaa
tttctcgatcaatcagagaaattgaattaccagtcatcccagtcaaccagtgaaaattta
ctacaatcaccacaacatgcagaacagtcttcacagcagcctagtcaagcttacccgcag
tatgttccaaaccagtatcaactattacggagacatcaaggtagcatacagaaccaacaa
ttgatgccaaagactgattcattgagagattcctcagtggcttcacattttgccgagcag
ctaatacctggtaatgcaaaaatagtctattccgatcctttgattcagtcatcatctgca
caggaccagtctcagacacaataccaccagattggttcttctgaggaccatgctaaaagt
gttcaattccttggtcatctgggatctcaaggttttcatgtctcagtttcagaggattca
caacctctgctgcatccaaatgtgcagtctgatggattttcagacaagtttgatcatttg
tcaactggactgcaagcagaggatctccagtttcagtggaattctcaaccattacatgca
cagatgccagataaattatcttgtcaacaacttgaggaggagctggaaagaacaataagg
caagatgaccctcagcgatgtgatctatctaccagagatgtgaactctgaacatgaagac
tatataaacaagcaaaattatattaaacaagtaaggtggctgctatttatacaccatgct
cgccggtgtccagcaccgaagggattatgcaaagaagctaactgcaccaaagttcaagag
ttggttttgcatatggacacctgtaagaatgaccactgtaattttccacgctgtttccaa
tctaggaaacttgttgggcatattcgcaattgcaaagtgctcgattgtcctgtctgcatc
ccagtacgcaaccatttagctgcaaattataaagcacatgctcatgctttatctggtacc
gctggggaaactgaaacacaaaaggttaccgaaacaataaaaaaagataccatgccaact
gaaaattttgaggacaaagagtatttggctaagcgcctgaaggttcaaaatacaaccttt
tctcctaacaatgatttttcacgagttcagttttcatctgggaatcaagcatctgatccc
caggaggcacagtctttggaattcaaacaaactcttcctgctatttctgaggtgattgtg
aagatggatgaatcttctggatccaggcaagacaaaaaaccaactcttagcagtacaagc
aatgggtttgtaagttcaccaaactggaaaaaagatcctattgctaagtctgttgatgtt
catgtgaaacaagagagcatgttggttgataacgtgccagaccagtcagtcagtaatatc
cagcaggatcatgaaaacctacaaacagatttagtcagtggaaataaatcaggaaagcca
aaaataaaaggtgtttcattgatcgaactgttcactcccgaacaaattaaggagcacata
gttggtctgaggcaatgggttggtcagagtaaagcaaaagctgagaagaatcaagcattg
gagcgctcaatgacagagaactcatgccagctttgtgcagtagaaaaactcacttttgac
cctcctccaatatattgttccccatgtggcgctcgaataaaacgaaatgctttttattat
acagttgggactggtgaaacccgtctttacttctgtattccttgttataatgaagcccgt
ggtgacactatagaagctgaaggatctactttcttaaaagcaaggctagagaagaggaga
aacgatgaggaaactgaagaatggtgggtgcagtgtgataaatgtgaatcttggcaacac
caagtatgtgctctttttaatggtcgaagaaatgacggtgaagcagaatatacttgccct
aattgctgtgtggaggagatagagaaaggggaacgaaagcccttgcctgaaactgctgtt
cttggtgcaaaagatttgcctagaactatactgagtgatcacatagagcagcggcttttt
agacagcttaagcaggagaggcaagagagagctaggcagcttgggaaaagttatgatgag
gtgcctggtgctgaaggacttgtggttagagttgtatcatctgttgataaaaaattggaa
gtaaagcagcgttttcttgagatatttcaggaagaaaattacccaaaagagttcccctat
aaatccaaggctatattgctgtttcagaaaatagaaggtgtagaagtatgcctttttggg
atgtatgttcaagaatttagttcagaatgttcatttcctaatcagaggcgtgtctatcta
tcatatctagactctgttaagtacttcaggcctgagatcaaggcagtgagcggggaagct
ttgcgaacttttgtctatcatgaaattctgattggataccttgagtattgcaagaaacgg
ggctttactagctgttatatatgggcttgtcctcctttgaagggtgaagactacatatta
tactgccatcctgagattcagaagactccaaaatctgacaaacttagggagtggtacttg
acaatgctacgaaaagcttctaaggagaatattgttgttgagctgataaatttatatgat
catttctttacaactatgggtgagtgcaaggccagagtaactgcagctcgtttaccatat
ttcgatggagattattggcctggtgcagctgaggatatgataaaccaacttcgtcaagaa
gaagacggtagaaaacaactgaagaaaggaaaaaccaaaaagactattacgaaaagggct
ttaaaagctgctggccagactgatctttctggaaatgcctctaaggatgccctgctaatg
caaaaacttggcgaaactatatgccctatgaaggaagattttataatggtccatttacaa
tattcctgtacacattgttgtatattaatggtatctgggacgcgatgggtttgcaatcaa
tgcaaaaactttcaactttgtgataggtgtcatgaagcagaactaagaattgaggaaagg
gataaacatcctcctaatagtagggaaaagcatctgctatatccagttgaaattaatgat
gttgcatatgacacaaaggacaaagatgagattcttgaaagtgagtttttcgacactagg
caggcatttctgagcctttgtcaagggaaccactatcagtatgatacgctacggcgtgct
aagcattcatctatgatgatcttataccatctccacaatcctgctgcccctgcatttgtt
accacatgcaatgtttgccaccgtgatattgaatctggtttggggtggcgttgtgaaagt
tgtcccgattttgatgtatgcaatgattgttataaaaaaggtggtattgaccatccacat
aagttgactaatcatccatcaatggcggatcgtgatgcacaaaataaagaagctcgagca
aaacgtgttttacagcttaggaaaatgttggatcttttggtgcacgcttcccagtgtcgc
tctcctcaatgccaatatccaaattgccgcaaagttaaaggtcttttccgccatggaatt
caatgcaggacgcgtgcttctggaggctgtgttctgtgtaagaaaatgtggtacctcctc
caaatacattctcgcgcttgtaaagaatcagaatgcagcgtaccgcggtgcagggatttg
aaagagcacttgagaagattgcagcagcagtctgattccagaaggcgggcagcagtgatg
gagatgatgcgacaacgggcagctgaggttgcagggagcacttga
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integrated database retrieval system
