Zingiber officinale (ginger): 122003016 Help Entry 122003016         CDS       T08725                                  Name (RefSeq) SART-1 family protein DOT2-like   KO K11984   U4/U6.U5 tri-snRNP-associated protein 1 Organism zof  Zingiber officinale (ginger) Pathway zof03040   Spliceosome Brite KEGG Orthology (KO) [BR:zof00001]  09120 Genetic Information Processing   09121 Transcription    03040 Spliceosome     122003016  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03041 Spliceosome [BR:zof03041]     122003016    04121 Ubiquitin system [BR:zof04121]     122003016 Spliceosome [BR:zof03041]  Complex B   U4/U6.U5 tri-snRNP components    U4/U6.U5 tri-snRNP specific factors     122003016  Complex C    U4/U6.U5 tri-SnRNP specific factors     122003016 Ubiquitin system [BR:zof04121]  Ubiquitin ligases (E3)   Single Ring-finger type E3    Other single Ring-finger type E3     122003016 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  SART-1 Phage_tail_terminator_6 Motif Other DBs NCBI-GeneID:  122003016 NCBI-ProteinID:  XP_042414376 LinkDB All DBs Position 7A:141936091..141945926 Genome browser AA seq 983 aa AA seqDB search MIDLEMGEISLERNEDDRATRRDDAGGLNDDAETNNVSKEKSRESEKHRSKDGSKAKRED RDHGSKGRERSKERVSEDYTARDSDRYDARDRDRSESGRDRRKEERSQYGKHRDHDKDRD KERSRDRVREEEHSRDKYREKDRGKDLGRERERSTDREYERSRDHGKSRGRERENDSEIE KEREMVRDHDMAKDRDHDRSKTRDRESERERRKEINIEKGKDNKNREKEKDRDRTKDKER EKTKDREKDRDRDWEKERDKSKEKLREKEIDRSVESDRVKPRTKDRENWAAGAKESEKDD RIQSNIEIDRLDAREEEASWNEIDTHEMSKHKNQQTEKLAEFPSTSVLETRITKMKEERT KKKSDGDSDILAWVSKSRKLEEKKNAEKEALRLSKVFEEQDNLLAESDDEEPAGNTQNLA GVKILHGLDKVIEGGAVVLTLKDQDILRDGDVNDEIDMLENVEIGEQKMRDAAYNASKKR TGLYDDKFSDQSGPQRAILPQYDDPMEDEGISLDEGGRFTGEAEKKLAELRKRIEGGGSV QKGFEDLRASAKITSDYYTPEELLQFKKPKKKKSLRKKEKLDLDAMEAEAVSAGLGASDR GSRTDSRRQAAKEEKEKIEVEIRNRAYQAAYDKAEAASKILRHEQTLTFKSTEDEDFVFG EEYEDLQRSLEQERKLAHRKQDETAASGLQAVALRATSSKEQEHSQSQYTGEPQEEKVVI TEVEEFVLGLQLTQGAQKPESEDVFMDDDDSPISLDTETKGDDVGWTQVEETTKAEVSDN ENTDDASPDEIIHEVAVGKGLSGALKLLKERGALKETIDWGGRTMDKKKSKLVGIYDNEG AKEIRIERTDEFGRIMTPKEAFRMLSHKFHGKGPGKMKQEKRMKQYHEDLKTKQMKASDT PLHAVEKMREAQAQLKTPYLVLSGHVKPGQTSDPRSGFATVEKDHLGSLTPMLGDKKVEH FLGIKRKPDMGSMGPPPPKKPKS NT seq 2952 nt NT seq  +upstreamnt  +downstreamnt atgattgatttggagatgggcgagattagcttggaacggaatgaagatgatagagcaaca cgcagagatgatgcaggtggattgaatgatgatgcggagaccaacaatgttagcaaggag aagtccagagagtctgaaaaacacagaagcaaagacggaagtaaagcaaaacgagaagat agggatcatggaagcaagggaagggaaaggtccaaagaaagagtgagtgaagattacact gccagagattctgatagatatgatgcaagggatagggatagatcagagagcggtagggac agaagaaaagaagaaagatcacaatatgggaaacacagagatcatgacaaggatcgagac aaagagaggagcagagatagggttcgcgaggaagaacatagccgtgataaatacagggag aaggatagaggaaaggaccttggtagagagagggagcgaagtactgatcgggaatatgag agaagtcgggatcatggaaaaagtagaggaagagaacgagagaatgacagtgagattgag aaggaaagggagatggtgcgagaccatgatatggcgaaggaccgtgatcatgataggagt aaaactcgtgatagagaatcagaaagggaaagaagaaaagagataaatattgagaaggga aaggataataaaaacagggaaaaagagaaggaccgtgaccgaacaaaggacaaggaaaga gagaaaactaaagatcgagaaaaagatagggatagagattgggaaaaagaaagagacaag agtaaggaaaagttgagagagaaggaaattgatagaagtgtggagtctgatcgagttaaa ccaagaacaaaggatagagaaaattgggcagctggagctaaagaaagtgagaaggatgat agaatacaatctaatattgagattgataggcttgatgcaagggaggaagaagcatcttgg aatgagatagacacccacgaaatgtctaaacacaagaatcagcaaactgaaaagctggca gaatttccatcaacctcagttcttgagacgaggataacaaagatgaaagaagaaagaacg aagaaaaaatctgatggtgattctgatatactagcatgggtgagcaagagtaggaagctt gaggagaagaagaatgctgaaaaggaagctctacggctttcaaaagtttttgaggagcag gataatctcctagctgagagtgatgatgaggaaccagctggaaacacacaaaatctagca ggagttaaaattcttcatgggcttgataaagtaatagagggtggggcagttgttttgaca ctcaaagatcaagatattcttagggatggtgatgtcaatgacgagattgatatgcttgag aatgtggagattggggagcagaaaatgagagatgcggcctacaatgcttccaaaaagaga actggactatatgatgataagtttagcgatcaatcgggacctcaaagagcaattcttccg caatatgatgatcccatggaagatgagggaatatcattggatgaaggtgggcgctttaca ggtgaagctgagaagaagctcgcagagctacgcaagaggatcgaaggtggtggctctgtc cagaaaggctttgaagatctgagagcttcagcaaaaattacatcagactattatactcct gaagaattgcttcagtttaagaagccaaagaaaaagaaatctctgagaaaaaaagaaaag ttagatttggatgccatggaagctgaggctgtttctgctgggttaggagccagtgatcgt ggttcgaggaccgactcgagaaggcaggctgccaaggaggaaaaggagaaaattgaagtt gaaataagaaacagagcataccaggcagcatacgacaaagcagaagcggcttcaaaaatt ttgcgtcatgagcaaaccttaacattcaagtctacagaggatgaggatttcgtctttggt gaagagtatgaagatctgcaaaggtctctagaacaagaaagaaaacttgctcatagaaaa caggatgaaactgctgcttctggtcttcaggctgttgctcttcgagctacgtctagtaaa gaacaagaacattctcagagccaatacacaggagaaccacaagaagaaaaagttgtaatt acagaagttgaggagtttgttcttggtcttcaacttacacaaggagcccagaaacctgaa tcagaagatgtttttatggatgatgatgattctcccatttctctcgatactgaaacaaaa ggtgatgatgttggatggacccaagtggaagaaactacaaaagctgaagtttctgataat gaaaatacggatgatgcttctccagatgagattattcatgaggttgctgtaggaaaaggt ttatcaggtgcactgaagttacttaaagaacgaggtgcacttaaggagaccatagattgg ggtggcagaactatggacaaaaagaaaagtaaacttgtcgggatttatgacaatgaaggg gcaaaagaaatccgaattgagaggactgatgaatttggccgtataatgacgcctaaggaa gcatttcgaatgctttcacataaatttcatggcaaaggtccaggaaagatgaagcaggag aagcgaatgaaacaatatcatgaggatttgaagactaagcagatgaaagcttcagacact ccattgcatgcagtggaaaaaatgagggaagctcaagcccaacttaagacaccttatttg gtgctaagtgggcatgttaaaccagggcaaaccagtgaccccagaagtggttttgctact gtcgagaaagatcatttggggagtttgacacccatgctcggtgacaaaaaggttgaacac ttcctcgggatcaaacggaaacctgatatgggcagcatggggccaccgccacccaaaaaa ccgaagagttga

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