Zingiber officinale (ginger): 122003075
Help
Entry
122003075 CDS
T08725
Name
(RefSeq) VAMP-like protein YKT61 isoform X1
KO
K08516
synaptobrevin homolog YKT6
Organism
zof
Zingiber officinale (ginger)
Pathway
zof04130
SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
122003075
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
zof04131
]
122003075
Membrane trafficking [BR:
zof04131
]
SNARE
VAMP, Ykt6, Sec22 (R)
Ykt6
122003075
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Longin
Synaptobrevin
Motif
Other DBs
NCBI-GeneID:
122003075
NCBI-ProteinID:
XP_042414445
LinkDB
All DBs
Position
7A:complement(142598721..142602598)
Genome browser
AA seq
229 aa
AA seq
DB search
MKITALLVLKTSGAGAGDTSSSSSSGASDPVVLANASDVSHFGYFQRSAAKEFILFVSRT
VAKRTTPGQRQSVQHEEYKVHSYNRNGLCALAFMDDHYPVRSAFSLLNTLLCGSAVNVPV
FLPFLNHVLDEYQKTFGESWRAQQTDSTQPWSFLTEALTKFQDPAEADKLLKIQRDLDET
KIILHKTIDSVLARGERLDSLVEKSSDLSAASQMFYKQAKKTNQCCTML
NT seq
690 nt
NT seq
+upstream
nt +downstream
nt
atgaagatcactgccctcctcgtcctaaaaacctccggcgccggcgccggcgatacctcc
tcatcttcttcttctggagcatcggatcccgtggtcctcgccaacgcctccgacgtcagc
catttcggatacttccagaggtcggccgccaaggagttcatcctctttgtctcccgcacc
gtcgccaagcgaacaacccccgggcagcgccagtccgtgcagcacgaagagtacaaggtg
cactcttataaccgaaatggcctttgcgctttggctttcatggatgatcattatccagtt
cgaagtgcattttctcttctaaacacgctgttatgtggttccgcagtcaatgttcctgtc
ttccttcccttcttgaatcacgtactggatgaatatcagaagacatttggtgagtcttgg
agagcccagcaaactgattctactcaaccatggtcatttctaactgaagcattgacaaaa
ttccaggatcctgcagaggctgataagttactgaaaattcagagggaccttgatgaaact
aagattatccttcataaaactattgatagtgtgctcgctcgaggagaaaggttggatagc
ctggttgagaagagttcagatctcagcgcagcatcacaaatgttctacaaacaagccaag
aaaaccaaccaatgctgcaccatgctgtga
DBGET
integrated database retrieval system
