Zingiber officinale (ginger): 122003502
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Entry
122003502 CDS
T08725
Name
(RefSeq) zinc finger protein MAGPIE-like
KO
K25870
zinc finger protein IDD3/4/5/6/7/8/9/10/11/12/13
Organism
zof
Zingiber officinale (ginger)
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
zof03000
]
122003502
Transcription factors [BR:
zof03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
122003502
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
C2CH-4th_BIRD-IDD
C2H2-2nd_BIRD-IDD
C2CH-3rd_BIRD-IDD
zf-C2H2
zf-C2H2_4
zf-C2H2_jaz
zf-met
zf-C2H2_STOP2_C
zf-C2H2_6
MMACHC
Motif
Other DBs
NCBI-GeneID:
122003502
NCBI-ProteinID:
XP_042414545
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Position
7B:3610229..3611643
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AA seq
368 aa
AA seq
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MQFQNLFNFKNAKEDPQMSATEAISKTFSHSCNPPPPPKKKRNLPGTPDPEAEVIALSPR
TLLASNRFVCEICGKGFQRDQNLQLHRRGHNLPWKLRQRGSKESRKRVYVCPEPACVHHN
PSRALGDLTGIKKHFCRKHGEKRWKCDKCAKKYAVLSDWKAHVKTCGSREYRCDCGTLFS
RRDSFITHRAFCDALAEETARVSAAVFNNITSNMDLKPTSFINVNNGDQVIVEQQQVKQR
ESRGVNTNSAFNNGDLYGSCSNLQQPEGQLSWAGNSTNNHGDIFSLSTTRTVKGENVFAH
GSFPSLFSSLEHNPTLGSDTSATALLQKAAQVGASTIPFLGSLFKEELGGETRDFLGVGM
HPSFSGWL
NT seq
1107 nt
NT seq
+upstream
nt +downstream
nt
atgcagttccaaaatctcttcaacttcaagaacgcaaaagaagatccacaaatgtctgca
acggaagccatctccaaaaccttcagccactcctgcaatcctccaccccctccgaagaag
aagcggaatctccccggaacaccagatcctgaagcggaggtgatcgctctgtctccgaga
acactgttagcgagcaaccgtttcgtgtgcgaaatctgcggcaaggggttccagcgcgac
cagaacctgcaactccaccggcgcggccataacctgccgtggaagctccggcagcgcggc
agcaaggagtcgcggaagcgcgtgtacgtgtgcccggagccggcctgcgtccaccacaac
ccctcccgcgccctcggcgacctcactggcatcaagaagcacttctgccggaagcacggc
gagaagcggtggaagtgcgacaagtgcgctaagaagtatgcggtgctgtcggactggaag
gcccacgtcaagacgtgcggctccagggagtaccgctgcgactgcggcactctcttctcc
aggagagacagtttcatcactcacagggcattttgcgatgccttggctgaggaaaccgca
agagtctcggcggcagtgttcaacaatattaccagcaacatggatctgaagccaacaagc
ttcatcaacgtcaataatggtgatcaggtaatagtagaacagcagcaggtcaagcaaagg
gagtctcgtggagtgaatactaattcagcctttaataatggtgatctctacggctcatgc
tcaaatttgcaacaacctgaaggtcagttgagttgggccggtaacagtactaataaccat
ggtgatatattctcattatcaaccacgagaacggtaaaaggggaaaatgttttcgcccat
gggagcttcccctccctctttagctctctcgagcataacccaacactggggtcggataca
tcggcgacagcattgctgcaaaaagcggcacaagttggtgcttccaccattccattcttg
ggtagcttattcaaggaggagcttggaggagagactagagatttcttaggtgttggaatg
catccgtcatttagcggatggctttga
DBGET
integrated database retrieval system