Zingiber officinale (ginger): 122004277
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Entry
122004277 CDS
T08725
Name
(RefSeq) ARF guanine-nucleotide exchange factor GNOM-like
KO
K18443
golgi-specific brefeldin A-resistance guanine nucleotide exchange factor 1
Organism
zof
Zingiber officinale (ginger)
Pathway
zof04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
122004277
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
zof04131
]
122004277
Membrane trafficking [BR:
zof04131
]
Endosome - Golgi transport
Arf GTPases and associated proteins
Arf GTPase associated proteins
122004277
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Gene cluster
GFIT
Motif
Pfam:
Sec7
TPR_28
Sec7-like_HDS
Mon2_C
DUF3526
Motif
Other DBs
NCBI-GeneID:
122004277
NCBI-ProteinID:
XP_042415123
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Position
7B:29135846..29138778
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AA seq
823 aa
AA seq
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VLHEFVRPFDFQNLTLDSALRLFLDTFRLPGESQKIQRVLEAFSERYFEQSPEILVDKDA
ALVLAYSLIMLNTDQHNAQVKKKMTEEDFIRNNRRINGGNDLPREFLSELYHSICRNEIR
TIPEQVSGFSEMYHSRWINLIRKSKKMSPYIVCDSRPLLDLQMFTIMSGPTVAAISVVFD
NAEHEEILLTCIDGFLTVAKISAHYHLEDALDDLVVSLCKFTTLLDSSFFEEPVTIFADD
MKARLALETVFSIANSYGDCIRNGWRNILDCILRLHKLGLLPACITSDAADDSETSLDLV
YGKLVPNSLSTSQVQMVTPRKSSGLMGRFTQLLSFDIEDKRLEPDEQQLAAHQRTLQIIE
ECHIDSIFMESKFLHADSLMQIARALTVAGHPQKVTNSPDDEETAVFCLELLIAITLNNR
DRIGLLWQGVYEHIANIVQSTAVPCALVEKAVFGLLRICQRLLPYKENLVDELLRSLQLV
LKLDARVADAYCENITQEIARLVKANATHMKSQVGWRTIISLLSITARHPEASEVGFEAL
LFIMSEGAHISPANYILLIEASRHFAESRVGLTDRSVRAIDLMAESFNCLFCWSRETRDA
GEEADKISDGIREMWERLIQALRKICLDQREKVRNHALLSLQKCLVGAEGMCLLPSTWLW
AFDQVIFTVLDDLLEIVQNQSPKDYRNMEGTLTHAMKLLSRVFLQLVQELSQQSSFCKLW
LGVIERMEKYMKVKVRGRKSEKLQELIPELLKNILLIMKSKGILSERSTTDEDNLWELTW
LHINNIAPLLQSELLPVQEMEQLHSGVQADLSSPRLVAEPSVG
NT seq
2472 nt
NT seq
+upstream
nt +downstream
nt
gtgcttcatgagtttgtccgcccttttgatttccagaatttgactttggatagcgctctt
cgcctttttctagataccttccggttgcctggtgaatctcagaagattcagagggtactc
gaggctttctcagagcgatactttgaacaatcaccagagattcttgttgacaaggatgct
gcccttgtgctggcttattcacttataatgctcaatactgaccaacataatgcccaggtt
aagaagaagatgactgaggaggattttatacggaataatcgtcgcattaatggtggaaat
gatcttccaagggagtttttatcagaactctatcactcaatatgcaggaatgagataagg
acaattcctgaacaggtttctggtttttcagaaatgtatcacagccgttggattaatctt
atccgaaagtccaagaagatgtctccttatattgtttgtgattcccgtcctctccttgat
cttcaaatgtttacaatcatgtcaggtcccactgttgctgctatctcagtagtttttgat
aatgcagaacatgaagaaattcttttgacatgtatagatggcttcttgactgtggcaaag
atctcagcacactaccatctagaagatgctttagatgatttagtagtgtccctatgcaaa
ttcacaaccctcttggactcatctttctttgaggaaccagtgaccatatttgcagatgac
atgaaagctagattagcgcttgagacagttttcagtatagcaaattcatatggagactgc
atacgtaatggctggagaaatatccttgattgcatactaagattgcacaaattgggtctt
cttcctgcttgcattaccagtgatgccgctgacgattctgaaacttctctagatttagtc
tatggaaagcttgttcctaactcactttctacctctcaagttcaaatggtcactccccgt
aaatcctctgggttgatggggagatttacccagctgttatcttttgacattgaagataaa
aggttggaaccagatgaacagcagcttgctgctcatcagaggacactgcagataatagag
gagtgtcacattgacagtatattcatggaaagcaagtttttacatgctgattcactaatg
cagattgctagggcccttactgtagccggtcatcctcagaaagttaccaattcacctgat
gatgaagaaactgcagttttttgcttggagctacttattgctatcacattaaacaatcga
gatagaattggactcctctggcaaggtgtatatgagcacatagccaatatagttcagtct
actgcagtaccttgtgctcttgtggaaaaggcagtttttggactcctaagaatttgccag
aggttactaccttacaaggagaacctggttgatgagcttttaagatcactgcagttggtt
ttaaagcttgatgcacgtgttgcagatgcttattgtgagaatattactcaggaaatcgca
cggcttgtgaaggctaatgcaacccatatgaaatctcaggttggttggcggaccataatt
tcactgctttctatcacagctcgccacccagaagcttcagaagtgggttttgaagcactt
ttgttcattatgtctgaaggagctcacatttcaccggccaactatatccttttgattgaa
gcttcacgtcattttgcagaatctcgtgttggactaacagatagatcagtacgagcaata
gatctaatggcagaatcctttaattgtcttttttgctggtctcgtgagactagggatgct
ggtgaggaagctgataaaatttcagacggaattagagagatgtgggaaaggcttatccaa
gcactgagaaagatctgcctggatcagagagagaaagtaaggaatcatgctttgttatct
ttgcagaaatgcctggtaggagcagaaggaatgtgcctgttaccctcaacatggttgtgg
gcctttgatcaagttatatttactgtgcttgatgatttactggagattgtacaaaaccag
tcgccaaaagattaccggaacatggagggcacacttacgcatgccatgaagttgctatca
agagtgtttttgcagctagttcaagagctttctcagcaaagtagtttctgcaagctgtgg
ctaggggtcattgagcggatggagaagtacatgaaagttaaggtgagaggtaggaaaagt
gagaaactacaagaactgattcctgaacttctcaagaacattctgttgatcatgaaatca
aagggaatcctttcagaaaggagcaccacagatgaagataacttgtgggagttgacatgg
cttcatataaacaatattgcacctctattgcagtctgaattgttacctgttcaggaaatg
gaacaattacattcaggtgttcaggctgatctgagtagccctaggctagtggctgagccc
tctgttggttag
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