Zingiber officinale (ginger): 122004448
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Entry
122004448 CDS
T08725
Name
(RefSeq) biotin carboxylase 2, chloroplastic-like
KO
K01961
acetyl-CoA carboxylase, biotin carboxylase subunit [EC:
6.4.1.2
6.3.4.14
]
Organism
zof
Zingiber officinale (ginger)
Pathway
zof00061
Fatty acid biosynthesis
zof00620
Pyruvate metabolism
zof00640
Propanoate metabolism
zof01100
Metabolic pathways
zof01110
Biosynthesis of secondary metabolites
zof01200
Carbon metabolism
zof01212
Fatty acid metabolism
Module
zof_M00082
Fatty acid biosynthesis, initiation
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00620 Pyruvate metabolism
122004448
00640 Propanoate metabolism
122004448
09103 Lipid metabolism
00061 Fatty acid biosynthesis
122004448
Enzymes [BR:
zof01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.4 Other carbon-nitrogen ligases
6.3.4.14 biotin carboxylase
122004448
6.4 Forming carbon-carbon bonds
6.4.1 Ligases that form carbon-carbon bonds (only sub-subclass identified to date)
6.4.1.2 acetyl-CoA carboxylase
122004448
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Motif
Pfam:
CPSase_L_D2
Biotin_carb_N
ATP-grasp
ATP-grasp_5
GARS_A
RimK
Dala_Dala_lig_C
Motif
Other DBs
NCBI-GeneID:
122004448
NCBI-ProteinID:
XP_042415269
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Position
7B:75300852..75414723
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AA seq
394 aa
AA seq
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MDCRDCHSPDYDVPTLQDSSSLLCCDEIVVVDPDSDDIIVADIVDDDARTQESLPVVVHS
PEPKLEPEPLLDDEEVIVTIPEPPGTFQHDKGLFFQPAGGIKGSQFNFNVGHVANFCKVY
YPRRPSSYVAKRSRNDGRVLNEICRDEKILVANRGEISVRVIRTAHEMGIPCVAVHSTID
RDALHVRLADDAVCIGEAPSSQSYLHIQNVLSAAVSRGCTMLHPGYGLLAENARFVDMCR
GHGVNFIGPNPDSIRVMGDKSTARETMKKAGVPTVPGSDGLLQSTEEAVKLAHEIGFPVM
IKATAGGGGRGMRLAKEPDEFVKLLQQAKSEAAAAFGNDGVYLEKYIQNPRHIEFQVLAD
KYGNVVHFGERHCSIQAKAWKNVMVVMLELFDLH
NT seq
1185 nt
NT seq
+upstream
nt +downstream
nt
atggattgtagagattgtcatagccctgattatgatgttcctactctacaggactcctct
agccttttatgttgtgatgaaatagttgtagttgatcctgattctgatgacattattgtt
gcagatattgttgatgatgatgcaaggacccaagaatcactacctgtggttgtacattca
cctgagcctaaactagagcctgaaccactacttgatgatgaggaggtcatagtcaccatt
ccagaacctccaggtacctttcaacatgataagggactgttctttcaacctgctggagga
ataaaaggatcacaatttaactttaatgtgggacatgttgccaatttctgcaaagtttat
tatcctagaagaccatcatcttatgtggccaagagatctagaaatgatggaagagtgctt
aatgaaatttgccgggatgaaaagattcttgtggccaatagaggagaaatttcagtcaga
gtgatccgaacagcacatgaaatgggtataccttgtgtagctgttcactctactattgat
cgggatgctctacatgtgcggcttgcagatgatgcagtctgcattggtgaagctcccagc
agtcaatcgtatttgcacattcaaaatgttttatctgctgctgttagtcgtgggtgtacg
atgttgcatcctggttatggtttgttagctgagaatgctcgttttgttgatatgtgcaga
gggcatggagtcaattttattggacccaatccagacagcattcgtgtaatgggtgacaaa
tctacagctagagaaacaatgaagaaagctggtgttcctactgtaccaggaagtgatgga
cttttgcagtcaacggaggaggctgtgaagcttgcccatgaaattggttttcctgtcatg
atcaaggcaactgctggtggtggaggacgtggaatgagattagctaaagaacctgatgag
tttgtgaagttgctacagcaagctaagagtgaggcagcagctgcatttggaaatgatgga
gtttatttggagaaatatatccaaaatccaaggcacattgaatttcaggttctagctgac
aaatatggtaatgttgtccatttcggggagcgtcattgtagcattcaggcaaaagcctgg
aagaatgtaatggttgttatgttagagctctttgacttgcactaa
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