Zingiber officinale (ginger): 122004878
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Entry
122004878 CDS
T08725
Name
(RefSeq) transcription factor E2FB-like isoform X1
KO
K06620
transcription factor E2F3
Organism
zof
Zingiber officinale (ginger)
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
zof03000
]
122004878
Transcription factors [BR:
zof03000
]
Eukaryotic type
Helix-turn-helix
Fork head/winged helix cell cycle-controlling factors, E2F
122004878
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Gene cluster
GFIT
Motif
Pfam:
E2F_CC-MB
WHD_E2F_TDP
COG3_N
TrmB
HTH_47
UPF0242
DUF2250
TMF_DNA_bd
FlaC_arch
Motif
Other DBs
NCBI-GeneID:
122004878
NCBI-ProteinID:
XP_042415644
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Position
7B:complement(685624..691467)
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AA seq
458 aa
AA seq
DB search
MSGSRTSGDRLAQPCGQIPQPLKHQHLLLSSPRPSSRADNHCFTVADGQASGAEVADSLI
VNSPLKRKPEQGDNEASKLSEWKTTSGSPEVVINPLVKMTKKTYSRSKVSKSSKSDIKDS
LPNAAGSPSCNALSLVGTCRYDSSLGLLTKRFINLLKHAQDGTLDLNKAAETLEVQKRRI
YDITNVLEGIGLIEKNLKNKIHWTGLDDAMPGEVENDMPMLQTEVENLVSQERQLDECIS
KMQESMSVFTEEESNQKLLYLTEDDIKRLPCFQNQTLIAIKAPHGTTLEVPDPDEAFEYP
HQRYRIVVRSTMGPIDIYLVSKFEKNFEEMNGVETPSRTDHVTNSQSLETSILAVATDES
RDKKLEFKNQDSQGCLDASSAEDNGSGMTKIVASEIDTDADYWLQSDFGASITDLWNTPH
ESYWNGFSTDDFITGSTTPPEHQTPCVAIDPPTHSPLR
NT seq
1377 nt
NT seq
+upstream
nt +downstream
nt
atgtccggcagtcgaacttctggggaccgcctggcgcagccgtgcgggcagatcccgcaa
ccgctgaagcatcagcacctactgttgtcctcgccgaggccgtcctcgcgggcggataac
cactgctttactgtcgctgatggacaggcatcaggcgccgaggtggctgattccttgatc
gttaactcgcctttaaagcgaaagcctgaacaaggagataacgaggcttctaagttgagt
gagtggaagactacttctggctctcctgaagtagtgatcaatcctcttgttaaaatgacc
aagaaaacatatagcagatccaaggtatccaagagcagtaagtcagatatcaaagactct
ctgccaaatgcagcaggttcaccttcatgcaatgctctctctcttgttggtacttgccgt
tatgatagctctttaggactcttgaccaaacgatttatcaatctacttaaacatgcacaa
gatggcactcttgacttgaataaagctgcagaaacacttgaggtgcaaaagaggcggatt
tatgacattactaatgtgcttgaagggataggattgatagaaaagaatctcaaaaacaag
attcattggacgggcttagatgatgcaatgccaggagaggttgaaaatgatatgccaatg
ctgcagacagaagttgaaaacctagtctcgcaagaacgtcagttggatgagtgcatcagc
aaaatgcaagaaagcatgagtgtgttcactgaagaagaaagtaatcaaaagctgctttac
ctgaccgaagatgacatcaaaagactaccctgctttcagaatcagacacttatagctata
aaagcacctcatggtaccaccctggaggttccagatcctgatgaggcttttgaatatcca
catcagagataccgaattgtcgtacgaagcacaatgggtcctattgatatttaccttgta
agtaaatttgaaaagaattttgaggagatgaatggtgttgagaccccttcaagaaccgat
catgtgacaaattcacaatcgcttgagacctccatcttggcagttgcaacagatgagagc
agagataagaaattggaatttaaaaatcaagatagtcagggatgccttgatgcaagttct
gcagaggataatggctctggtatgacaaagattgtagcttctgaaattgatactgatgct
gactactggcttcaatcagattttggagctagtattacagatttatggaacacaccacac
gaatcatattggaacgggtttagtacagatgacttcattacaggcagtactaccccaccg
gagcatcaaactccatgtgtagctattgaccctccgacacattctccactcagataa
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