Zingiber officinale (ginger): 122004909
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Entry
122004909 CDS
T08725
Name
(RefSeq) probable serine/threonine-protein phosphatase 2A regulatory subunit B'' subunit TON2 isoform X1
KO
K11583
serine/threonine-protein phosphatase 2A regulatory subunit B''
Organism
zof
Zingiber officinale (ginger)
Pathway
zof03015
mRNA surveillance pathway
zof04382
Cornified envelope formation
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
122004909
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
122004909
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
zof01009
]
122004909
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
zof03019
]
122004909
03036 Chromosome and associated proteins [BR:
zof03036
]
122004909
Protein phosphatases and associated proteins [BR:
zof01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
122004909
Messenger RNA biogenesis [BR:
zof03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
122004909
Chromosome and associated proteins [BR:
zof03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
122004909
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EF-hand_6
EF-hand_7
EF-hand_1
EF-hand_8
EF-hand_5
SPARC_Ca_bdg
EF-hand_SWAP70_N
Motif
Other DBs
NCBI-GeneID:
122004909
NCBI-ProteinID:
XP_042415699
LinkDB
All DBs
Position
7B:1002317..1010372
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AA seq
478 aa
AA seq
DB search
MYSGPSGEGGGGHEAAAPKKIPSASSMPWVRNLRRYVGSGAGLGSEALMELETKRILLEI
FKERQQKNAKAGKIPSFYKKKPEEGSISHRVQGLAKYRFLKKQSEILLNADDLDAMWACL
RENCVIDDATGAEKMNYEDFCHIASLCTEQIGPKCRKFFSPSNFMKFEKDESGRIAILPF
YLYVMRTVSLTQARIDMSELDEDSDGFLQPHEMEAYIRGLIPNLAQLRDMPGAFIQMYCR
IAARKFFFFCDPHRRGKSCIKKVLLSNCLQELMELHQESEEEVPDTEQAENWFSLTSAQR
ICDMFLALDKDKNGTLSKQELKEYAEGTLTEIFIERVFDEHVRRSKAGGGNTREMDFESF
LDFVLGLENKDTPEGLTYLFKCLDLQGRGYLSTADMHTLFRDVHQKWIDGGNYELCIEDV
RDEIWDMVKPVDPLRITLADLLACKQGGTVASMLVDVRGFWAHDNRENLLQEEEPEEE
NT seq
1437 nt
NT seq
+upstream
nt +downstream
nt
atgtacagtggtcctagcggagaaggcggcggcggccacgaggccgccgcgccgaagaag
attccgtccgcatcctccatgccttgggtacgcaaccttcgccgctacgtcggatccggc
gccggacttggctccgaagccctcatggagctggaaacgaaaaggatattgcttgaaatt
ttcaaagagcggcaacagaaaaatgctaaagctggcaaaatccctagtttctacaaaaag
aagcctgaagagggatcaattagtcatagggttcagggattggcaaagtatcgatttttg
aagaagcaatcagaaattttactgaatgctgatgacctggatgctatgtgggcttgctta
agggaaaattgtgttattgatgatgctactggagctgaaaagatgaactatgaagatttc
tgtcacattgcctctctctgcacagagcaaattggtcccaagtgtcgaaaattttttagc
ccttcaaatttcatgaaatttgagaaggatgaatctggcagaattgcaatcctgcctttc
tatctatatgtgatgcgaacggtttcacttacgcaggcaagaattgatatgagtgagctt
gatgaggattcagatggttttcttcaacctcatgaaatggaggcatatataagaggtctt
attcctaatttggcacaactccgtgacatgcctggagcctttattcagatgtattgtcga
attgctgcacgcaagttcttcttcttttgtgaccctcatagacgaggaaaatcatgcata
aagaaggtgctgctgagcaactgtctccaagagctcatggaacttcatcaggaaagcgaa
gaagaagttcctgacacagagcaggcagagaactggttttcattgacttctgcacagagg
atatgtgatatgtttcttgctttagataaagacaagaatggaacattaagtaagcaagag
ctcaaagaatatgccgaagggacactaactgaaatctttattgagagagtctttgatgag
catgtacgccgaagtaaagctggagggggtaatactcgtgagatggacttcgaaagcttt
ctagattttgttttgggccttgaaaataaagacacacctgaaggattaacatacttattc
aaatgccttgatcttcaaggacggggctatctttcaactgcggatatgcataccttgttc
agagatgttcaccaaaagtggatcgatggtggaaactacgagctatgcattgaagacgtg
agagacgaaatctgggacatggtcaaaccagtagaccctcttaggatcacacttgccgat
cttcttgcctgcaagcaaggcggtacagtcgccagcatgctagtggatgtacgtggtttt
tgggcccatgacaacagggaaaacctactgcaggaagaagaacctgaggaagaatga
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