Zingiber officinale (ginger): 122004965
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Entry
122004965 CDS
T08725
Name
(RefSeq) regulatory-associated protein of TOR 1-like isoform X1
KO
K07204
regulatory associated protein of mTOR
Organism
zof
Zingiber officinale (ginger)
Pathway
zof04136
Autophagy - other
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09140 Cellular Processes
09141 Transport and catabolism
04136 Autophagy - other
122004965
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
zof04131
]
122004965
Membrane trafficking [BR:
zof04131
]
Autophagy
Other autophagy associated proteins
mTORC1 complex
122004965
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Raptor_N
WD40_Prp19
WD40_CDC20-Fz
WD40_WDHD1_1st
WD40
Beta-prop_EML_2
WDR55
Beta-prop_TEP1_2nd
HEAT
Beta-prop_EML
Beta-prop_WDR90_POC16_2nd
EIF3I
WD40_MABP1-WDR62_2nd
HEAT_2
WDR90_beta-prop_4th
HEAT_EZ
Beta-prop_DCAF4
PEP5_VPS11_N
Peptidase_C14
Beta-prop_EIPR1
Beta-prop_RSE1_2nd
PROPPIN
Motif
Other DBs
NCBI-GeneID:
122004965
NCBI-ProteinID:
XP_042415779
LinkDB
All DBs
Position
7B:1546808..1562479
Genome browser
AA seq
1357 aa
AA seq
DB search
MALGDLMASRLSVSSPSVSNHLDEFSGREDGGAPVGEREQEAVHATESNLPVTAAAGATS
MAYLPQTVVLSEFRHEGFEDCAEVGPSDSGLVSKWRPKDRLKTGCVALVLCLNIGVDPPD
VIKISPCARMECWIDPHSMAAPKALETIGRALHAQYERWQPRARYKLQLDPTVEEVKKLC
NTCRKYARAERVLFHYNGHGVPKPTANGEIWVFNKQSYTQYIPLPINELDSWLKTPSIYV
FDCSAAGMIVKAFLERQDWNTSGSSGSSSKDFILLAACEAHETLPQSVEFPADVFTSCLT
TPIKMALRWFCSRSLLRDSLNYSLIDQIPGRQNDRKTLLGELNWIFTAVTDTIAWNVLPH
DLFQRLFRQDLLVASLFRNFLLAERIMRAANCSPVSYPLLPPTHQHHMWDAWDMAAEICL
SKLPQLIADPNADFQSSPFFTEQLTAFEVWLDHGSEHKKPPEQLPIVLQVLLSQSHRFRA
LVLLGRFLDMGPWAVDLALSVGIFPYVLKLLQTTATELRQILVFIWTKILALDKSCQVDL
VKDGGHTYFIRFLDSMDAYPEQRAMAAFVLAVVVDGHRRGQEACIEANLINVCLKHLQIA
NPSDGQTEPLLLQWLCLCLGKLWEDFPEAQVIGLQADAPTIILPLLLEPQPEVRASAAFA
LGTLIDVASVSFGDGHGVDEDFDDDEKIKAELNIIKNLLQLAVDGSPLVRAEVAVALARF
AFSYNKPLKSTAVENWKPLTSQPSLASINHLNNYTPSQFVQVGSSISHIGPVLRGNSESI
TAGREGRISSSSPIASVGIMHGSPLSDDSSHHSDSGILTKEIGSNGVINCSRARPFDNAL
CSQFTMALFNMTKDPSPRVANLARRALSIIGIELVVTKAPRLGINHGDSSVPSHTSNLPG
LARSSSWFDLNAGHISVAFRTPPVSPPRQSYMAGLRRVCSLEFRPHQLNSPDTGLADPLL
GAAGSSGGSERSLLPQSTIYNWSCGHFSRPLLAGADDNEETISRREERERIALDRIVKCQ
HSSNVKLANQIASWDTKFETGMKASLLLPFSPIVVAADENEQIRVWNYEEATTLNSFDNH
ESSDRGISKLSLVNELDDSLLLVASSDGNVRFWKNFTERGKQKLVSAFSSLQGHRNAARG
TAAVVDWQQQSGYLYASGGTSSVLLWDLDKEQLVSSIPSSSDSCISALSASQVQGGQFAA
GFVDGTIRIYDIRTPEMPVCTAQPHTQKVEKVVGIGFQPGLDTTKIVSASLAGDIQFLDV
RNQSEPYLTIDAHRGSLAALAIHRHAPIIASGSAKQIVKVFSLKGEQLSIIRYYPTFMAQ
RIGSVSCLTFHPYRVLLAIGAADACVSIYADDTYQTR
NT seq
4074 nt
NT seq
+upstream
nt +downstream
nt
atggcattgggagatctgatggcatccaggttgtctgtgtcgtcgccgtccgtttcgaat
catctggatgagttctctggccgggaggatgggggagcgcccgtgggagagagggaacag
gaggcggtgcatgcgactgagagcaacttgccggtgacggcagctgcgggagccaccagc
atggcgtacttgcctcagacggtcgtgctctcagaattccggcatgagggttttgaggat
tgcgccgaggtggggccttcagatagtgggttggtgtcgaagtggcggcccaaggaccgg
cttaagacaggatgcgtggcactcgtgttatgtttaaatattggtgttgacccgcctgat
gttattaaaatatctccttgtgcccggatggagtgttggatagatccacattctatggct
gctccaaaagctcttgaaacaattggaagggcattgcatgctcaatatgagcgctggcaa
cctcgggctcgttataagctccaactggatcccaccgtggaggaagtgaagaagctttgt
aatacttgccggaaatatgccagggcggaaagggttctattccattataatgggcacgga
gtgcctaagcctacagcaaatggagaaatttgggtcttcaacaagcagagctacacacaa
tatattccattaccaatcaatgagcttgactcgtggcttaagacaccttcgatctatgtg
ttcgactgttctgcagcagggatgattgtcaaagcctttctagagcgccaagattggaac
acttctggttcttctggttcctcatcaaaggattttattttgcttgctgcttgtgaagcc
catgagacgcttccacagagtgttgaatttcctgctgatgtgttcacatcctgcctcact
acacctattaaaatggcattgcgttggttttgctctcgatctttgcttcgtgattcactc
aactactctcttatcgatcaaattcctggccgtcaaaatgaccgaaagacacttctaggg
gagctgaattggatttttactgctgtcactgacacaattgcatggaatgtccttcctcat
gatcttttccaaagactatttaggcaagatctgttagttgcaagtctctttcgcaatttc
ttacttgctgagcgaattatgagagctgcaaactgctctcctgtttcatatccattgttg
ccgccaactcatcagcatcatatgtgggatgcatgggacatggctgctgaaatttgcttg
tctaaacttccacagttgattgcggatcctaatgctgatttccagtcaagcccattcttc
accgagcaactcacagcttttgaggtgtggctagaccatggttccgaacacaagaaacca
ccagagcagctaccaatagttcttcaggttttactaagccagtctcatcgattccgggca
ttggttctcttaggaagattccttgatatgggaccttgggctgtggatctggccttatct
gttggcatctttccttatgtcctaaagcttttacaaaccactgctactgaattgcgacaa
atactggtgttcatttggaccaaaattcttgcccttgataagtcttgtcaggtagatctg
gtaaaagatggcggccacacatattttatcaggtttctcgatagcatggatgcctatcct
gagcagcgagcaatggctgcttttgtcttggcagttgtagtggacggacatcggcgggga
caagaagcatgcattgaagcaaatttgataaatgtgtgcctgaagcatttacaaattgct
aatccaagtgatgggcaaactgagcctttacttcttcaatggctttgtctatgtctggga
aagctatgggaagattttccagaagcacaagtcataggtttgcaagctgatgcgccaaca
ataattttacctttattattggagccacaacctgaggttagagcttctgctgcttttgct
ttgggaacccttattgatgttgcatctgtctcatttggtgatggacatggcgttgatgag
gactttgatgatgacgaaaagataaaagctgagctgaatatcattaaaaaccttctacaa
cttgctgtggatggaagtcctttggtgcgggctgaggttgctgtagctcttgcccgcttt
gccttttcttacaacaaacctctcaagtcaactgctgttgaaaattggaagcctctgacc
tctcagccttctcttgccagcataaatcatcttaacaactatacacccagccaatttgtg
caggtgggaagctcaatctcacatattggtcctgtattaagaggaaatagtgagagtatc
actgctggtagagaaggaaggatatcctcaagtagccccattgcatcagttggcataatg
catggttctccactctctgatgattcttctcatcattctgattctggtatactgaccaaa
gaaattggtagtaatggggtcattaattgctctagagcaagaccttttgacaatgctcta
tgttctcagtttactatggctttgtttaatatgacaaaggatccttctcctcgtgttgca
aaccttgcccgaagagcactttccataattggtattgaactagtggtcacaaaagctcca
aggttaggcataaaccatggcgattcttctgttccatctcacacttctaatcttccagga
ttggcacgctcatcttcgtggtttgacttgaatgctggtcacatatctgtggcattccgg
acgcctcctgttagtcctcctcgtcaaagttatatggcaggacttcgccgagtatgctct
ctcgagttcaggccacatcaactgaattctccagatactggattagctgatccacttcta
ggagctgctggatcttctggtggttctgagcgtagtttacttccacaatcaactatctac
aattggagttgtggccatttttctagaccacttctcgctggagctgatgacaatgaagaa
actatttctagaagggaagaaagagagaggattgctttagatcgcatagttaaatgccaa
cattcttctaatgtcaaacttgccaatcaaattgctagctgggacactaagtttgaaaca
ggcatgaaggcttcactgctcttgcctttttctccaattgtagttgctgctgatgagaat
gaacagatcagggtatggaattatgaagaagctactactttgaacagttttgataatcat
gaatcatctgatagagggatatccaagctctcccttgtaaatgaacttgatgacagcttg
cttctagttgcttcaagtgatggaaatgttcgcttttggaaaaatttcacggaacgaggg
aaacaaaaacttgtatcagcattctcttcacttcaaggtcatcggaatgcagctcgtggc
acagctgctgttgttgattggcagcaacagtctggttatttgtatgcttctggaggcaca
tcatctgtcctgctttgggatctggacaaagagcaactagttagctccatcccatcatca
tctgacagttgcatatcagctttgtctgcttctcaagttcagggtggtcaatttgcagct
ggctttgttgatggtactatcaggatatacgacattcgtactcctgaaatgccggtctgc
actgctcagcctcacacacagaaggtagagaaggttgtgggaattggttttcagcctgga
cttgatacaactaagattgtcagtgcatcgctagcaggggatatacagttcctggatgtt
agaaaccaatctgaaccatatcttaccattgatgcacataggggttcccttgctgccttg
gcaattcatcggcacgctccaattattgcaagtggttctgctaagcaaattgtgaaggtt
ttcagtctaaaaggagagcagctaagcatcatcagatattaccctactttcatggctcag
agaataggttctgttagctgtctcactttccacccgtacagagtactccttgctattggt
gctgccgatgcctgtgtatctatctatgcagatgacacttaccaaacaagatga
DBGET
integrated database retrieval system
