Zingiber officinale (ginger): 122004985
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Entry
122004985 CDS
T08725
Name
(RefSeq) RNA polymerase II C-terminal domain phosphatase-like 2 isoform X1
KO
K18998
RNA polymerase II C-terminal domain phosphatase-like 1/2 [EC:
3.1.3.16
]
Organism
zof
Zingiber officinale (ginger)
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
zof01009
]
122004985
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
zof03021
]
122004985
Enzymes [BR:
zof01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.16 protein-serine/threonine phosphatase
122004985
Protein phosphatases and associated proteins [BR:
zof01009
]
HAD phosphatases
Fcp/Scp phosphatases
122004985
Transcription machinery [BR:
zof03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
122004985
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Retrotran_gag_2
NIF
zf-CCHC
TYA
Motif
Other DBs
NCBI-GeneID:
122004985
NCBI-ProteinID:
XP_042415804
LinkDB
All DBs
Position
7B:1805751..1820015
Genome browser
AA seq
746 aa
AA seq
DB search
MTSRRVGISCKVYHGDVFLGDAEAFPTTNSSGGKVQPLPFPSGNEIRIDHLSPPSERCPP
LSVLQTINPFFVRCKIQAKSIAEHPLHHLYLSCFNEFRSAVVVNGNEELHLVAMPSKVEK
VSCFWCCSVQAGLYASCLGMLNLRCLAIVFDLDETLIVANTMRSFEDRIEALSRKIDGEK
DPIRISGMSAELKRYVEDKDLLKQYIEMDTVTDNRRSITAQNEEVPSIPGVQERITRPVI
RMPERNIVLTRINPENRDTSVFVRLRPAWEDLRSYLTAKGRRRFEVFVCTMAERDYALEI
WRLLDPDSYLINAKQLMDRIVCAKSGSKKSLQHVFQDKVCHPRMAMVIDDRLQVWDDKDQ
PRVHVVPAYTPYYAPQAEMANAVPVLCVARNVACNVRGGFFKEFDENLLQKIFELNYENE
IVELPGAPDVSYYLISEDANNLQNNNREAPIVEGMTGLETEHRLNQPVKRIRMSSLNLHS
ILDTNKLTGQNFLDWFRNLRIVLKVEKIAYVLEGPLPTSLADDATSDQLLAYQKHMIDSE
LASCIMLASMSPELQKQHEHMDAYTIVYHLRELFDEQARIERFEVSKLLFGSKMQEGSSA
VQFVLKMNGYIERLRSLGFAMDHELSIGLILHSLSNSYSQFVMNYRINQIESTIPELINM
LKIVELSVKKEPKVVMLFDSSKKGSKRKLKTQAKGKKKPKKGELAPKGSCHHCGEMGHWK
RNCKIYLESLKKKTTSDAPSASGAKE
NT seq
2241 nt
NT seq
+upstream
nt +downstream
nt
atgacgagtcgtcgggtggggattagctgcaaggtgtaccacggggatgttttcctcgga
gatgcggaagcttttccgacgaccaacagtagcggcggcaaggtccaacccttgcctttc
cccagcggcaacgagattcgcatcgatcacctctcgcctcccagcgagcgatgccctccc
ctctccgtcctccaaaccatcaaccctttcttcgtccgctgcaagatccaagccaagtcg
atcgctgaacatccactccatcacctctacctctcctgcttcaacgaattcaggagtgcc
gtcgtggtcaatggtaacgaagagctgcatctggtggcaatgccgagcaaggtggagaag
gtatcctgcttttggtgctgttcggttcaggccgggttatatgcatcctgtttgggcatg
ctcaacttgcggtgtcttgccattgtatttgatctagatgagacgctcatagttgccaac
accatgaggtcatttgaggatagaattgaggccctctctcgaaagatagatggtgaaaaa
gaccctattaggatttcaggaatgtcagctgaactgaagcgatatgttgaggacaaagat
ctcttgaagcagtatatagagatggatactgttaccgacaatcggagatccattaccgct
cagaatgaggaagttccatcaatacctggtgttcaggagagaattactcggcctgtcata
cgaatgcctgaaaggaacattgtcttgactcggatcaatcctgagaaccgtgatactagt
gtttttgtaaggctaaggcctgcatgggaggatctaaggagctacctaactgcaaaagga
cgacgaagatttgaagtttttgtctgtacaatggctgaaagggactatgctctggagatc
tggaggcttcttgatccagactcttatttgatcaatgcaaaacaacttatggatcgcata
gtatgcgcaaaatcaggttcgaagaaatcattgcaacatgttttccaggataaagtgtgc
catcctagaatggctatggtgattgatgaccgattgcaggtttgggatgacaaggatcag
cctcgtgttcatgttgtcccagcatatactccatattatgctcctcaagctgagatggcc
aatgcagttccagtattatgtgttgcaagaaatgttgcatgcaatgttcgaggtggcttt
ttcaaagaatttgatgaaaatcttcttcagaagatatttgaactgaattatgagaatgag
atagttgagctacctggtgctcctgatgtgagctactatttaatctctgaggatgctaat
aacttacaaaacaacaatagagaagctcctattgttgagggaatgactggtttggaaaca
gaacatagattgaatcaaccggttaaaagaatcagaatgtcttctttaaatttgcattca
attttggacacaaacaagttgactgggcaaaactttttagattggtttcgaaacctgaga
attgttctcaaggttgagaagattgcctatgtcctcgaagggcctcttcctacgagtctg
gctgatgatgcaacttctgaccaattgttggcttatcagaagcatatgattgattctgaa
cttgcaagctgcatcatgctagcctcgatgtctcctgaactacaaaaacaacatgagcat
atggatgcttatacgattgtttatcatcttcgtgagttgttcgatgagcaagcgagaatc
gaacggttcgaagtctccaagctcctctttggctcaaagatgcaggagggttcatctgca
gtgcaatttgtactaaagatgaatggctatattgagcggttgagatcgcttggatttgca
atggatcatgagttaagtattggcttaattcttcatagtttgtccaatagctattcacaa
tttgtgatgaactatcggataaatcaaattgaatccacaattcctgagttgatcaacatg
cttaagatagtggagctatcagttaagaaggaaccgaaagttgtaatgttgtttgattcc
tcaaagaaaggttctaagaggaagttaaaaactcaagctaaagggaagaaaaagcctaaa
aaaggagaattggcaccaaagggctcatgtcaccattgtggcgagatgggacactggaaa
agaaactgtaagatttatcttgagtcattgaagaagaagacgacatctgatgccccatct
gcttcaggagctaaggaatag
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