Zingiber officinale (ginger): 122005004
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Entry
122005004 CDS
T08725
Name
(RefSeq) polyubiquitin
KO
K08770
ubiquitin C
Organism
zof
Zingiber officinale (ginger)
Pathway
zof04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
122005004
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
zof04121
]
122005004
Ubiquitin system [BR:
zof04121
]
Ubiquitins and ubiquitin-like proteins
Ubiquitins
122005004
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ubiquitin
Rad60-SLD
Ubiquitin_2
Rad60-SLD_2
Dsc3_N
TBK1_ULD
DUF2604
Ubiquitin_5
UBL_UBAC1
Motif
Other DBs
NCBI-GeneID:
122005004
NCBI-ProteinID:
XP_042415832
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All DBs
Position
7B:2112924..2114982
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AA seq
457 aa
AA seq
DB search
MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN
IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLI
FAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKA
KIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKT
ITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR
LRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL
ADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQ
QRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGQ
NT seq
1374 nt
NT seq
+upstream
nt +downstream
nt
atgcagatcttcgtcaaaaccctaactggcaagaccatcacccttgaggtggagtcttct
gacaccatcgataatgtaaaggcgaagatccaggacaaggaagggatccctccggaccag
caaaggctgatctttgccggaaagcagctcgaggacggccgcaccctcgctgactacaac
attcagaaagaatccactctgcacctggtgctccgtctccgcggtggcatgcagatcttc
gttaaaaccctaaccggcaagactattactcttgaggtcgaatcctccgataccattgat
aacgtcaaagccaagatccaggacaaggagggcatccccccagaccagcaaaggctgatc
ttcgccggaaagcaactcgaggacggccgcacccttgccgactataacattcagaaagaa
tccaccctccaccttgtgctccgtctccgtggtggcatgcagatcttcgttaaaacccta
accggcaagactattactcttgaggttgaatcctctgataccatagataacgtcaaagcc
aagatccaggacaaggagggcattcccccggaccagcaaaggttgattttcgccggcaag
cagctcgaggatggccgcactctggccgactacaatatccagaaggagtctactctccac
cttgtgctccgacttcgtggtggtatgcagatctttgtcaaaaccttgacgggaaaaacc
atcacccttgaggtcgagagctccgacacaatcgacaatgtgaaggccaagatccaggat
aaggagggcatcccccctgaccagcaaaggttgatttttgccggaaagcagcttgaggat
ggtcgcactctggccgactacaatattcaaaaggagtccaccctccacctagtgctccgc
ctccgtggtggcatgcagatcttcgtcaagaccttaacgggcaagaccattaccctcgag
gtggagagctcagacaccatcgacaacgtgaaggctaagatccaggacaaggagggcatt
cccccggatcagcaaaggctcatctttgcaggtaagcagctcgaagatggccgcaccttg
gccgattacaacattcagaaggagtctacccttcacttggtgctgaggctgaggggaggg
atgcagatattcgtcaagaccctcactggtaaaaccatcaccctggaggtagagagctcg
gacacgattgacaacgttaaggcgaaaatccaggacaaggaggggatcccaccggatcag
cagaggctcatctttgcagggaagcagctggaggacggccgcaccctggcggactacaac
attcaaaaggagtcgacgcttcacctggtgctccgtctccgcggaggccagtga
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