Zingiber officinale (ginger): 122005020
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Entry
122005020 CDS
T08725
Name
(RefSeq) threonine--tRNA ligase, mitochondrial 1-like
KO
K01868
threonyl-tRNA synthetase [EC:
6.1.1.3
]
Organism
zof
Zingiber officinale (ginger)
Pathway
zof00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
122005020
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
zof01007
]
122005020
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
zof03016
]
122005020
Enzymes [BR:
zof01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.3 threonine---tRNA ligase
122005020
Amino acid related enzymes [BR:
zof01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
122005020
Transfer RNA biogenesis [BR:
zof03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
122005020
Prokaryotic type
122005020
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2b
HGTP_anticodon
TGS
tRNA_SAD
tRNA-synt_His
Motif
Other DBs
NCBI-GeneID:
122005020
NCBI-ProteinID:
XP_042415850
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All DBs
Position
7B:2435937..2450022
Genome browser
AA seq
734 aa
AA seq
DB search
MLRCRGCRWFSPLAPPSSFCRLPRHFSGFPLPPVSSMGDSAGRGGSADVKASKSKTSSSP
ISAHKDEVYLDGVIQKRIKLFETIQAQQKAERLKLDGEPIKIKLPDGTIKEGKKWLTSPM
DIAKEISAGLAASALIAQVNGTLWDMTRPLEGDSDLKLFKFDDNEGRDTFWHSSAHILGQ
SLEMEYGCRLCIGPCTTRGEGFYYDAFYDDLTLNEENFNQIQSRASKAAGEKQPFERIEV
TREQALEIFAENKFKVEIINELPEDKTITVYRCGPLVDLCRGPHIPNTSFVKAFACLKAS
ASYWRGKSDRESLQRVYGISFPDSKRLKEYLTQIEEAKKRDHRILGQNQDLFFFHQLSPG
SCFFLPHGTRIYNKLIEFLRAQYRDRGYQEVITPNIYNMQLWETSGHAANYKENMFVFEI
EKQEFGLKPMNCPGHCLMFEHRVRSYRELPLRLADFGVLHRNELSGALTGLTRVRRFQQD
DAHIFCRESQIKEEVKNVLDFISHTYGIFGFTFELELSTRPEKYLGEIEIWDKAEAALGE
ALNEFGRPWQINEGDGAFYGPKIDIGVFDALKRKFQCATLQLDFQLPLRFKLSYSAEDEA
KLERPVMIHRAILGSVERMLAILLEHYKGKWPFWLSPRQAIVCPVSEKSQSYAEQLRDKI
HKAGYYVDADLTDRKIQKKVREAQLAQYNYILVVGEEEAKTGQVSVRVRDGSDHSVMSLD
ALLEHFRKEVEAYH
NT seq
2205 nt
NT seq
+upstream
nt +downstream
nt
atgctccgttgccgcggctgccggtggttctcgcccttagctcctccgtcgtccttctgc
cgtcttccgcgccatttttccggattccctctgcccccggtctcctccatgggagatagc
gctggccgaggtggttctgccgatgtcaaagcctccaaatccaaaacctcctcttcaccc
atctccgcccacaaagacgaggtctacctcgacggcgtcatacagaagcgaatcaagcta
ttcgagaccattcaagcccaacagaaggcggagcgcctcaaactcgacggagaacccatc
aaaataaaattgcctgatgggacaatcaaagaagggaagaagtggttgacatcaccaatg
gatattgctaaggagatatcggctggattggctgcaagtgctttaatagctcaagttaat
ggaactctctgggacatgacaagacctcttgagggtgactcagacctcaagttgtttaaa
tttgatgacaatgaagggcgtgacaccttttggcattctagtgctcacattctagggcag
tcccttgagatggagtatggatgcaggctatgcattggaccatgtactactagaggagag
ggtttttactatgatgctttctatgatgacttgacattgaatgaggagaactttaaccaa
attcagtctcgggcaagcaaagctgctggggaaaaacaaccatttgagcgaattgaggtg
acaagggaacaagctcttgaaatatttgctgaaaacaaattcaaggtagaaatcattaat
gaattgcctgaggataagacaatcactgtttatagatgtggccctctggtcgatctttgt
cgtgggcctcatatacccaacacatcttttgtcaaagcatttgcttgtctaaaggcttca
gcttcatattggagagggaaatctgatcgggagagtctacaaagagtctatggtatatca
tttccagattcaaaacgtctcaaggagtatctgacccagatagaggaagcaaagaaacgt
gaccacaggatacttggacagaatcaagaccttttcttttttcaccaacttagtcctggg
agctgcttcttccttccacatggaaccagaatttacaacaagttaattgagttcttgaga
gctcagtacagagatagaggctatcaagaggtcataacaccaaatatatacaatatgcaa
ttgtgggaaacttcaggacatgctgcaaattacaaggaaaacatgtttgttttcgagata
gagaagcaagaatttggactaaaaccaatgaattgtcctggtcattgtttaatgtttgag
caccgagtccgttcatatagagaattgcctcttcgcctagctgattttggagtgctccac
agaaacgagcttagtggtgcacttactggcctaacgcgtgttagaaggtttcagcaggat
gatgctcacatattttgcagggagagccagataaaggaggaggtcaagaatgtattggat
tttattagtcatacctatggtatatttgggtttacctttgagttggagttatcaacgcgg
cctgaaaaataccttggagaaatagagatatgggataaagctgaggcggctcttggagaa
gctttaaatgaatttgggaggccatggcagatcaatgaaggagatggtgcattctatggg
ccaaagatcgatattggtgtttttgatgcattgaaaagaaaatttcaatgtgcaactcta
cagttggatttccagcttcctctccgcttcaaattaagttattctgcagaagacgaagct
aaactcgaaagacctgtgatgattcacagagccatcttaggttctgttgaacgaatgctt
gccatccttttagaacactataaaggaaagtggcctttctggcttagccctcgtcaagcc
attgtctgtcctgtgtctgaaaaatcacaaagttatgcagagcagttacgagataagata
cacaaagctggttattatgttgatgctgacctaacagacagaaagattcagaaaaaggta
cgagaggctcaattagcacagtacaactacattctggtggttggcgaagaggaagcaaag
actggacaggtaagtgttcgcgtgagagatggatcagatcattctgtaatgagtttggac
gcgctacttgaacatttcaggaaggaagtcgaagcctatcattaa
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