Zingiber officinale (ginger): 122005025
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Entry
122005025 CDS
T08725
Name
(RefSeq) twinkle homolog protein, chloroplastic/mitochondrial-like isoform X1
KO
K17680
twinkle mtDNA helicase [EC:
5.6.2.3
]
Organism
zof
Zingiber officinale (ginger)
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03029 Mitochondrial biogenesis [BR:
zof03029
]
122005025
Enzymes [BR:
zof01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
122005025
Mitochondrial biogenesis [BR:
zof03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial DNA replication factors
Mitochondrial DNA maintenance factors
122005025
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DnaB_C
Toprim_4
Toprim
Toprim_2
AAA_25
ATPase_2
Toprim_3
AAA_29
DUF6944
DUF1720
eRF1_3
Viral_helicase1
Motif
Other DBs
NCBI-GeneID:
122005025
NCBI-ProteinID:
XP_042415854
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Position
7B:complement(2480731..2503128)
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AA seq
750 aa
AA seq
DB search
MPPVGCRPFQALLMSGSKYLPLRCFVAAAPAPLLLHRLLHLPTRTSAYFNYRLRSKHSRH
LFCSRQPRRDMAADCAVEVAVLQDDFLTKRLQDLQSKLEAIGIMCNDWKLGVGFSMPCPK
CKGRHPMDKNLFFCIQNTGKFATWKCLGSDCGWAGKIEATGEFMESYPLQKQATGEFMEQ
YAIRKQATGEDMGHYSKIKQATGEVMEHYAKRKQATGEDMEHYSKIKQATGEVMEHYAKI
KQASKSEDCKIIAESQLNLEPLSGEFIKFFEERRISEETLRRNGVLQNCTKTAIAFPYRR
DGEIISCKYRSVPKKFWQEKDKERILYGLDDIKNASEIIIVEGEIDKLSMEEAGYCNCVS
VPDGAPPSVSENIPTEEKDTKFQFLWNCKAYLEKASRIILATDADAPGQALAEELARRLG
RERCLRVKWPKKDATEVCKDANEVLMNLGPDALQKVIENAEFYPIRGLFQFGNFFHEIDA
YYHQHLGYELGVSTGWRAVDEYYKVVPGELTVITGVPNSGKSEWIDALICNINKSDEWKF
VLCSMENKVREHARKLLEKHIKKPFLNARYCGSAERMSIAEFEKGKEWLFDAFCLIRCEV
DSLPSIQWVLERAKGAVHRSGVRGLVIDPYNELDHQRDSSQSETEYVSKMLTKIKRFAQH
HSCHVWFVAHPRQLQNWKGGPPNLYDISGSAHFINKCDNGIVIHRNRDEKAGPLDAVQVC
VLKVRNKVIGKIGQAFLSYDRTTGEYKDLD
NT seq
2253 nt
NT seq
+upstream
nt +downstream
nt
atgcccccagtcggctgccgccctttccaagcccttctcatgtccggctccaagtacctc
ccgttgagatgcttcgtcgctgctgcacctgcgcctctcctcctccatcgccttctccat
cttcctacccgtaccagtgcctacttcaattatcgtcttcgttccaaacattctcgacat
cttttttgttcccgtcagcctcgccgcgacatggctgcggactgtgcagtcgaagttgcg
gtgctacaagacgacttcttgacgaagcgactgcaggatttgcagtcgaaactcgaggcg
ataggaattatgtgcaacgattggaagcttggggtgggtttctcaatgccatgcccaaag
tgtaaaggcagacatcctatggataagaacttatttttttgcatccaaaatactggaaaa
tttgcaacatggaaatgccttggaagtgattgtggatgggcaggcaagatagaggctact
ggagaattcatggaaagttatcccctccaaaaacaagctactggagaattcatggaacaa
tatgccataagaaaacaagctactggagaagacatgggacactattctaaaataaaacaa
gctactggagaagtcatggaacattatgccaaaagaaaacaagctactggagaagacatg
gaacattattccaaaataaaacaagctactggagaagtcatggaacattatgccaaaata
aagcaagcttcaaaatctgaagattgcaaaatcatcgcagaaagtcaacttaacctggag
ccattgtctggcgagtttattaaattctttgaagagagaaggatatcagaagaaactcta
cggcgaaatggtgttttacagaattgtacaaagacggctattgcttttccttacagaaga
gacggagagattataagttgcaaataccgttctgttcccaaaaaattttggcaggaaaaa
gacaaggaacgcattttatatggacttgatgatataaagaatgctagtgaaattataatt
gtcgagggagaaatagataagctctctatggaggaggctggctattgcaattgtgtcagt
gtacctgatggtgcacctccaagtgtttcagaaaatatacctactgaggagaaggacaca
aagtttcagttcttatggaactgcaaagcttacttagaaaaggcatctcggataatattg
gcaacagatgcagatgcccctggccaagccttagctgaagaactagcacgtcggcttggt
agagaaaggtgtttgagggttaagtggccaaagaaagatgcaactgaagtttgcaaagat
gctaatgaggttctgatgaaccttggaccagatgctctgcagaaagttattgagaatgct
gagttctatcctataaggggattattccaatttggtaactttttccatgaaattgatgcg
tattatcaccagcatcttggatatgagttgggtgtttctactggatggagagctgtggat
gaatactacaaggttgtaccaggtgagttaactgtaataacaggtgtccccaattcaggc
aaaagtgagtggattgatgccttgatttgtaacataaataaaagcgacgagtggaaattt
gtgctttgctctatggaaaacaaggttcgtgaacatgcaagaaagcttttggaaaagcac
attaagaaaccattcttaaatgcaagatattgtggatctgctgagcgtatgagtattgct
gaatttgagaaaggaaaagaatggctatttgatgccttttgtctgattcggtgtgaggtt
gatagccttccatctatccagtgggttcttgaacgtgcgaaaggggctgttcatcgatct
ggtgtccgtgggcttgtcattgatccatacaatgaacttgatcaccaacgggattcgagc
caatctgaaacagagtatgtgagcaagatgcttactaagataaaacgctttgctcagcac
cactcttgtcatgtatggtttgtagcccacccaagacagcttcaaaactggaaaggtggt
ccacctaatctttatgatattagtggaagtgcacactttataaataaatgtgataatgga
attgtgatccatcgaaatcgagatgaaaaagctggtccccttgatgctgtacaggtttgt
gtgctgaaggtgcgaaacaaggtcattggaaaaattggccaggcttttctgtcctatgac
aggaccacaggagaatacaaggatttggactag
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