Zingiber officinale (ginger): 122005154
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Entry
122005154 CDS
T08725
Name
(RefSeq) novel plant SNARE 13-like
KO
K08494
novel plant SNARE
Organism
zof
Zingiber officinale (ginger)
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
zof04131
]
122005154
Membrane trafficking [BR:
zof04131
]
SNARE
SNAP-25[N] (Qb)
NPSN
122005154
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec20
V-SNARE_C
MCPsignal
Occludin_ELL
ING
Helo_like_N
TMPIT
Med11
YkyA
Motif
Other DBs
NCBI-GeneID:
122005154
NCBI-ProteinID:
XP_042416019
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Position
7B:5877807..5890874
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AA seq
263 aa
AA seq
DB search
MTSDLPMSPELEEIDGKIQDIFRALQNGFQKLDKIKDPNRQSKQLEELTGKMKECKRLIK
EFDQELKDQENRNPPEVNKKLNEKKQTMIKELNSYVALRKTYQSSLGNKRVELFDMGTGT
SDPVADENVKMASDMSNQELIYAGRKQMDETDQVIERSKMVVEQTIEVGTQTAANIKGQT
EQMGRIVNELDTIQFSIKKASQLVKEIGRQVATDKCIMFFLFLIVCGVIAVIIVKVVHPN
NKSIPDIPGLAPPAPTGRKLLSA
NT seq
792 nt
NT seq
+upstream
nt +downstream
nt
atgacgagcgacctaccgatgagtccggagcttgaggagatcgatggcaaaatccaagac
atattccgagcactccagaatggattccagaaattggataagattaaagatcctaataga
cagtctaaacagttggaggagcttactgggaagatgaaggaatgcaagcggttaattaaa
gaatttgatcaagaacttaaggatcaagagaatcggaatcctccagaagttaataaaaaa
ctcaatgagaagaagcagaccatgatcaaggaactcaattcatatgtggccttgaggaaa
acgtaccaaagtagccttggtaataaaagagttgaactttttgatatgggcactggaacc
agtgatcctgtggctgatgagaatgttaagatggcatcagatatgtctaatcaagaactc
atatatgctggaaggaaacagatggatgagactgatcaagttattgaacgttcaaagatg
gttgttgagcaaactattgaagtaggtacccaaactgctgcgaatattaagggccaaaca
gaacaaatgggtcgaattgttaatgagctggacactatccaattctcaatcaagaaggct
tctcagttggtgaaagagattggtaggcaggttgctactgataagtgcatcatgttcttc
ctatttcttatagtttgtggtgtaattgcagtaatcattgtaaaggttgtgcatccgaac
aacaagagtattccagatatacctggattagcacctccagctccaaccggaaggaaatta
ctatccgcctaa
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