Zingiber officinale (ginger): 122005264
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Entry
122005264 CDS
T08725
Name
(RefSeq) amino acid transporter AVT1C-like
KO
K15015
solute carrier family 32 (vesicular inhibitory amino acid transporter)
Organism
zof
Zingiber officinale (ginger)
Pathway
zof04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
122005264
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
zof02000
]
122005264
Transporters [BR:
zof02000
]
Solute carrier family (SLC)
SLC32: Vesicular inhibitory amino acid transporter
122005264
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Ortholog
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GFIT
Motif
Pfam:
Aa_trans
RGCC
Motif
Other DBs
NCBI-GeneID:
122005264
NCBI-ProteinID:
XP_042416176
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Position
7B:9061341..9065346
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AA seq
539 aa
AA seq
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MKKDESDLASAIKLEIDDEGNLGHHNDGAVIFWSSSSSCSSSSSRGDCNGEDPDPYQTTW
PQSYRQSIDVFSSELSQKVELLKDSGFARVSNSFIRSSFSFDREELNSPTQSLLPRASER
NHVGADLAFVDTVPPKISQTFSSYNDLPPTRQCSTAQALVNGMNVLCGVGILSIPYAVKE
GGWLGLILLFGMGSISFYTGILLKRCLDSSPGLKTYPDIGHAAFGLAGRVFISIVLYLEL
YGCCVEFITMVGDNLESIFPNARTNFLGFDLSAQQSFAVATAIVVLPTVWLRNLSLLSYI
SAGGVFLSILVTICLLWVGVVDKVGFHSGGTALNLVDLPIAIGLYGFCYSGHSVFPNIYS
SMKNPSRFPIILLICFILSTILYSGVATAGYLIFGDSLKSQFTLNMPHQYLSSQIAVWTT
VISPLTKYALTITPIALSIEELLPSSGNLCFIMVLIRTLLVLSTLVVALTFPYFAYVMAL
LGSVFAMLLALILPCACYLSIKRKSATYLQVSVCTLIIMVAVASSFIGSYSSIKQMLAQ
NT seq
1620 nt
NT seq
+upstream
nt +downstream
nt
atgaagaaagacgagagcgatcttgccagtgcaatcaagttagagattgacgacgagggc
aacctcggccaccacaatgacggcgctgtgattttctggtcttcttcttcttcttgttcg
tcgtcgtcgtcccgtggcgactgcaatggcgaagatcccgatccttatcagacaacctgg
ccccagagttacaggcagtcgattgatgtttttagcagcgagttgagtcaaaaagttgag
ctcttgaaagattcaggtttcgcccgcgttagcaattcattcatcaggagttcattttct
ttcgaccgggaggaattgaattctccaacacaatccctgttacctcgtgcttcagagcgg
aaccatgttggagctgatctagccttcgtagacactgttccgccaaaaatttcacaaacc
ttttcttcttacaatgacttgccccctacgcggcaatgctctactgctcaagcattggtc
aatggaatgaatgttttatgtggagtgggaatcctctcaattccttatgcagttaaagaa
ggaggatggttaggcttgattttactgtttggaatgggttccatctcattttacactgga
atcttgctaaagcgatgtttagatagctctcccggactgaagacttatcctgatatcgga
catgctgcatttggattggctggacgtgtatttatatcaatagtgctttacctagaactc
tatggatgttgtgttgagttcataactatggtaggtgacaacttggaatctatcttccca
aatgcccggacaaatttcttgggatttgatttaagtgctcaacagtcttttgctgttgca
acagccattgtggttctccctaccgtttggctgagaaacctcagtttgctatcatatatt
tcagcgggtggggtgtttttatcaatattggtgacaatctgcttactttgggtcggtgtg
gtggataaagtgggtttccattcgggtggaactgcactgaatctcgtcgatcttccgatt
gcaattgggctgtatgggttctgctattcaggacattcagtttttccaaatatatattcc
tccatgaagaacccatctcgctttccaatcatcctactaatctgctttatactatctaca
attctgtattccggagtagctacggcggggtatttgatatttggtgattctctcaagtct
cagtttacgctgaatatgccccatcaatatctttcttctcagattgcagtatggactacg
gttataagtccgttgacaaaatatgctttgactataacgccaattgcacttagcatagaa
gaattgctgccttcatctgggaatttatgttttattatggtcttgatcagaacgcttctt
gttctttcaacgctggttgtggcacttacatttccatacttcgcatatgtcatggcactg
cttggttccgtctttgcaatgcttctggctctcattcttccctgtgcatgttatctcagc
atcaagcgtaaatctgcaacttatctacaggtctcagtttgcactctcattatcatggta
gcagtggcatcttctttcattggctcatacagctccatcaagcagatgcttgctcaatga
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