Zingiber officinale (ginger): 122005396
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Entry
122005396 CDS
T08725
Name
(RefSeq) RGG repeats nuclear RNA binding protein A-like
KO
K13199
plasminogen activator inhibitor 1 RNA-binding protein
Organism
zof
Zingiber officinale (ginger)
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
zof03041
]
122005396
Spliceosome [BR:
zof03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
122005396
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GFIT
Motif
Pfam:
HABP4_PAI-RBP1
Stm1_N
KH_KRR1_1st
Motif
Other DBs
NCBI-GeneID:
122005396
NCBI-ProteinID:
XP_042416358
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Position
7B:complement(15434435..15439846)
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AA seq
380 aa
AA seq
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MATVNPFDLLGDNENDDPSQFVVAPLQKVAAKKPAAPGITAPTVAKLPVKPVPPAQAVRE
SREGRSNAAPPRGDAGRAGLGRGRGGRGPSREFGNENVNGFSRSYGIVGGGGGGGGEDGD
ADKPEKARPARHPFGGGRRGGYGGRGGYGNDESGGDDERPPRRLYERRSGTGRSYEVKRQ
GAGRGNWGTVADDALSQEKEDALKSYEKPTDGHQERENAPLTEESKDKEDAIKETEEKEE
DKEMTLEEYEKIKEEKRKALLALKAEERKVEIDKELQSMQLLTTKKEMDPIFVKLGFDKD
AGKKKENVDGDERSKKPLNINEFFMTGEGKQYYSSASRGRGRGRGDRAPFRGGFGGRGSS
LVDAAPSIEDPSQFPMLSAK
NT seq
1143 nt
NT seq
+upstream
nt +downstream
nt
atggcgaccgtcaaccccttcgatctactgggagacaacgaaaacgatgatccatcgcag
ttcgtcgtcgcccctctgcagaaggtggcggccaaaaaacccgccgcgccaggcatcact
gctccgacagtggcgaagcttcccgtgaaaccggttccccctgcacaggccgtgagggag
tcgagggaaggcaggagcaatgctgcccctccacgtggtgatgctggccgtgctggactt
ggacgtggaagaggtggacgaggcccaagtcgtgaatttgggaatgagaacgtgaatggg
ttttctaggagctacggtatcgttggaggtggaggtggtggtggaggcgaagacggtgat
gctgacaagcctgaaaaggcacgtcctgcacgtcatccctttggcggtggccgtcgtggt
ggatacgggggccgcggtggctatggtaatgacgaatctggaggtgatgatgaacggcct
cctcgcagattgtacgagcgtcgcagtggtactggtcggagttatgaggtgaagcgtcag
ggtgcaggtcgtggtaactggggaactgtagctgacgatgcactttcacaggaaaaggag
gatgccctcaaatcctatgagaagccaactgatgggcaccaagaacgggaaaacgcacca
ttaacagaggagagcaaggataaggaggatgcaattaaggagactgaagaaaaggaagag
gacaaggagatgactttggaagaatatgagaaaataaaagaggagaaaagaaaagcctta
cttgcattgaaagccgaggagaggaaggttgaaatcgacaaggagttgcagtctatgcag
ctactaacaacaaagaaagaaatggaccctatttttgttaaattgggttttgacaaagat
gcagggaaaaagaaagaaaatgttgatggtgatgaacggagcaaaaaacccctgaacatc
aatgagttcttcatgactggcgaaggtaagcaatactacagctctgctagccgtggacgt
ggccgaggaagaggtgaccgtgcaccattcagaggtggttttggcggccgaggttcgagc
ctcgtcgatgctgctccatctattgaagatcccagccagtttcccatgctcagcgccaag
tag
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integrated database retrieval system