Zingiber officinale (ginger): 122005436
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Entry
122005436 CDS
T08725
Name
(RefSeq) F-box/LRR-repeat protein 2-like
KO
K10268
F-box and leucine-rich repeat protein 2/20
Organism
zof
Zingiber officinale (ginger)
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
zof04121
]
122005436
Ubiquitin system [BR:
zof04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
122005436
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
LRR_6
LRR_4
LRR_At1g61320_AtMIF1
LRR_RPS2
LRR_EndoS
LRR_8
LRR_14
LRR_At5g56370
F-box_5
CCDC73
Motif
Other DBs
NCBI-GeneID:
122005436
NCBI-ProteinID:
XP_042416404
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Position
7B:17517439..17529347
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AA seq
409 aa
AA seq
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MKVCINDALTDDELRAVLSRLEKEEERDLFGLVCKRWLRLQSSERRRLRARAGPAMLRQM
ADRFQGIVELDLSQSASRSFYPGVTDSDLAVIAAGFRALRVLDLQNCKGVTDVGMRTLGN
GLPTLQSLDVSQCRKITDKGMVAIALGCSNMRKLHLSGCKSVTDELLKALAKSCSRLEDL
GLSGCNNITNTGISTLADGCRYIKFLDVSKCSKISDVGVSKVAEATSSSLKILKLLDCSK
VSDKSIFSLAGFCHNLETIVIGGCRDISDESITSISLACSKSLRSLRMDWCLNITDLSLN
SVLSNCRHLVALDISCCDKITGSAFLAQEVSGFELRLKVLKMSSCMRLSVASVGLVLRSC
KYLVYLDLRSCPQITRQSCEQAGLLFPECCKTNYDGSLSLSEPMVDNFF
NT seq
1230 nt
NT seq
+upstream
nt +downstream
nt
atgaaggtctgcattaatgacgccctcaccgacgacgagctccgagcagtgctcagccgg
ctggagaaggaggaggagagggatctgtttgggctcgtctgcaagcgctggctccgcctg
cagagctctgagcgacgccgtctccgagcccgcgctggccctgccatgctacgccagatg
gccgaccggtttcaggggatagtggagttagacctttcgcaatccgcctcaaggtcgttc
taccctggcgttactgattcggatcttgctgtcattgctgcaggattccgggctttgcgt
gttcttgacctccaaaactgcaaaggtgtcactgacgttgggatgagaactctgggaaat
ggtctgccaaccctccagtcactagatgtttcccagtgtagaaaaattacagacaaagga
atggtggcaattgctctaggttgctcaaatatgagaaaactgcacttatctggatgcaaa
tctgtgaccgatgaattgttaaaagctcttgctaagagctgttcgcgccttgaagatcta
ggattgtctggatgcaacaacataacaaacactggaatctcaactcttgctgatggctgt
cgatatatcaagtttttggatgttagtaaatgttccaaaattagcgatgttggagtttcc
aaagttgctgaggctacatcatcatcactgaagattctcaaattgttggactgttccaaa
gtcagtgataaatctatcttttccttggctggcttctgccataaccttgaaactattgtc
attggtgggtgccgagacatctctgatgaatctataacatccatatcccttgcttgtagc
aaaagcttaaggagcttaaggatggactggtgcttaaatatcactgacttatccttgaac
tctgtgctgtcaaactgtaggcatcttgtggctcttgacataagttgttgcgataagata
accggttcagctttcctggcacaggaagtttcaggatttgagttgcgactgaaggttttg
aagatgagtagctgcatgagactctcagttgcctctgtaggtttggtactgcgatcttgc
aagtatcttgtataccttgatctgagatcatgcccacaaattacaagacaaagctgtgag
caagctgggttgctgtttcctgagtgctgtaaaacaaattatgatggtagtttaagctta
agcgaacctatggttgataacttcttttag
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