Zingiber officinale (ginger): 122005441
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Entry
122005441 CDS
T08725
Name
(RefSeq) LIMR family protein Os06g0128200-like
KO
K14617
LMBR1 domain-containing protein 1
Organism
zof
Zingiber officinale (ginger)
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09150 Organismal Systems
09154 Digestive system
04977 Vitamin digestion and absorption
122005441
04980 Cobalamin transport and metabolism
122005441
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
zof04131
]
122005441
Membrane trafficking [BR:
zof04131
]
Endosome - Lysosome transport
Others
Lysosomal membrane proteins
122005441
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LMBR1
CCSMST1
DUF7801
Motif
Other DBs
NCBI-GeneID:
122005441
NCBI-ProteinID:
XP_042416409
LinkDB
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Position
7B:17651777..17661269
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AA seq
510 aa
AA seq
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MGDFNLALVIVAVVVCVLVLLVNLYLLVNYQHPDDANQAYFPKMVVVLGLSVAAISILML
PADVANRHACQHAIYNGACSLTLPMKSLWLTVYIVDAVLVFLVIPFAMFYYEGDLDKTIG
KRLKSALVWVVTSAVVCGLVLGILYALVGKVDFTVRHLSSSATNFPSSWSTFSSSQPCIG
STNRLCDAYGAPASSETTWTMRASFPEYVVALATIVGSVLFTIFGGVGIACLPLSLIFSF
IRRPKAVITRSQYIKEATELAKKAKELKKASQALHQEERSGAKGRKWRKNVKAVEKELLL
LEDDMQALEEMYPQGEQAESLWALTVLGYIGKLVLGIVGLIVSVAWVAHIVIYLLINPPL
SPFLNGVFVKLDSVWGLLGTAAFAFFCFYLLLAVIAGETMLGLKLVFITIHPMRWGATLM
NSFLFNVGLILLCSISVIQFCATAFAYYSQATAAQEIFGHTLQSLRGIKYLYKYNVFQYG
FVILALITLFSYAAFGWKKRKPSGRFQLSS
NT seq
1533 nt
NT seq
+upstream
nt +downstream
nt
atgggggatttcaacctggctctcgtgatcgtggcggtggtggtgtgcgtgctggttctc
cttgtcaatctctacctcctcgtcaactaccagcaccccgacgatgctaaccaggcttac
tttcccaagatggtggtggttttgggcctctccgtggccgctatctccattctcatgcta
ccggccgacgtcgccaatcgccatgcctgtcagcatgctatatataatggcgcttgtagt
ctcaccctcccaatgaagagcctttggctgaccgtctacatcgtggatgctgttcttgta
ttcttggtaataccgttcgctatgttctactacgagggcgacctggacaagactattggg
aagaggttgaagagtgctctcgtgtgggtcgtgacatcagcagttgtctgtggacttgtg
cttggaattctttacgctctggttggtaaagtggacttcacagttagacacctgtcttcc
tctgcaacaaatttccctagttcttggtcaactttctcaagttctcaaccttgcatagga
tcaacaaatcgtctgtgtgatgcatatggagcacctgcttcatcagaaacaacttggaca
atgcgagccagctttccagaatatgtggttgctcttgcaacaattgttggatcagtgctt
ttcactatatttggtggtgtggggatcgcatgccttccactgagcctcattttttcattc
ataaggcggcccaaggctgtgataactcgttctcagtatatcaaggaggcaactgaactg
gcaaaaaaagctaaagaactaaagaaagctagtcaagctcttcatcaggaagagagaagt
ggtgctaaggggagaaaatggcgcaaaaatgtgaaggctgttgaaaaggagttgcttctc
ttggaagatgatatgcaagctttggaagaaatgtatcctcaaggagagcaggcagagagt
ctttgggctcttacagttcttggttacattgggaaacttgtattaggtattgtagggcta
attgtttcagtggcctgggtcgcacatattgtaatatatttgctgatcaacccaccactt
tctccgtttctgaatggagtttttgtcaagttggatagtgtgtggggcctgctaggtact
gcagcatttgcttttttctgcttctacctactcctcgcggtgattgccggggagacaatg
cttggacttaagttggtttttatcactatccatccaatgaggtggggagctactttgatg
aactcctttctctttaatgttggcctcattctgctttgctccatcagtgtcatccaattc
tgcgccactgcgtttgcatactattcacaagcaactgctgcacaagaaattttcggacac
acattgcaatctttacgaggaatcaagtacctatacaagtacaacgtgtttcagtatggt
tttgttatcctggcactaatcacacttttctcttatgccgcattcggatggaaaaagagg
aaacctagcggccgattccaactttcaagttga
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