Zingiber officinale (ginger): 122005452
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Entry
122005452 CDS
T08725
Name
(RefSeq) DNA topoisomerase 6 subunit A-like
KO
K10878
meiotic recombination protein SPO11
Organism
zof
Zingiber officinale (ginger)
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
zof03036
]
122005452
Chromosome and associated proteins [BR:
zof03036
]
Eukaryotic type
Meiosis-specific proteins
DSB formation-related proteins
122005452
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TOP6A-Spo11_Toprim
TP6A_N
Topo_VI_alpha
THD_CWZF3-5-7
Motif
Other DBs
NCBI-GeneID:
122005452
NCBI-ProteinID:
XP_042416420
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Position
7B:complement(18096607..18099012)
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AA seq
436 aa
AA seq
DB search
MSERKRRRSEAAAPVASISGGSTLKKPRRQDSHAQGLRKHLKSDAEILASIREMYEASRS
EASSSKAVSLSDLNLSSACREVSDRDVASVQVAIERTVLAVARSILAGSGFSFDVPSRAA
SNQLYVPEIDRIVLRDKSSSRPFASLSTVRKATITARVLSLVYAVLRRDIHITKRDLFYT
DVKLFQDQSHSDAVLDDVSCMLGCTRSSLHVVASEKGVVVGRLVFTDDGDRIDCTKMGIG
GKAIPPNIDRVGNLESDALFILLVEKDAAFMRLAEDRFYNRFPCIIVTAKGQPDVATRLF
LKRMKTELKLPVLALVDSDPYGLKILSVYMCGSKNMSYDSSNLTTPDIKWLGVRPSDLDK
YKVPEQCRLPMTDQDVKAGKDLLEEDFVKKNEGWVKELEMMVKTRQKAEIQALSSFGFQY
LSEVYLPLKLQQRDWL
NT seq
1311 nt
NT seq
+upstream
nt +downstream
nt
atgtctgagaggaagcggcgccgctctgaggcggccgcaccggtggcctctatttcgggc
ggttccaccttgaagaaaccccggaggcaggactcccacgcccaagggctgcggaagcat
ctcaagtccgacgccgaaatcctcgcctccattcgcgagatgtacgaagcttcccgatct
gaagcctcctcctccaaggccgtctccctttccgacctcaacctctcttccgcctgccgc
gaggtctccgatcgcgacgttgcctccgtgcaggtcgccatcgagcgcaccgtcctcgcg
gtggcccgatccatccttgctgggagcggcttctccttcgacgtgccctcccgcgctgcc
tccaaccagctttacgtccccgagatcgaccgcatcgtgctccgcgacaaatcatcctca
cgcccattcgctagtctctccaccgtccgcaaggccaccattacagcccgcgtgctttcc
ctcgtctacgccgtccttcgccgagacatccacatcactaagcgcgacctcttctacacc
gacgtgaagctcttccaggaccagtcccactccgatgccgtccttgatgacgtctcttgc
atgctcggatgcacccgatcctccctccacgtcgttgcctccgagaagggtgtcgtcgtt
ggtcgcctcgtcttcactgacgacggtgaccgaattgactgcactaagatgggcatcggc
ggcaaggccattcccccaaacattgaccgggtcggcaacctcgaaagcgacgccctgttc
attcttctcgtagagaaagacgccgcatttatgaggctcgcggaggatcgtttctacaac
aggttcccctgcattatcgtcaccgccaaaggccagccggatgttgctaccaggctcttc
ctcaagcggatgaagactgaactgaagctcccggttctggcactcgtcgacagtgatccc
tacggcctcaagatcctctcagtgtacatgtgtgggtcaaagaatatgtcttacgacagc
tcgaacttgacgactcctgatatcaaatggctgggggttcggcccagcgatctggataaa
tacaaggtgccggagcaatgtcggctccccatgacagatcaagacgtgaaggctgggaaa
gacttgttggaggaggacttcgttaagaagaatgaagggtgggtcaaggagctcgagatg
atggtcaagacaaggcaaaaggctgagatacaagcactaagttcatttggattccagtat
ctctctgaggtgtatttacctctgaaattgcagcagagggattggctgtga
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