Zingiber officinale (ginger): 122005457
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Entry
122005457 CDS
T08725
Name
(RefSeq) probable pectate lyase 4
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
zof
Zingiber officinale (ginger)
Pathway
zof00040
Pentose and glucuronate interconversions
zof01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
122005457
Enzymes [BR:
zof01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
122005457
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Motif
Pfam:
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-GeneID:
122005457
NCBI-ProteinID:
XP_042416425
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Position
7B:complement(18237119..18240175)
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AA seq
377 aa
AA seq
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MGGFRWLCCFSIQAPSQSPRPQSSSPSPFPPQPTPPGAPPSAWISAAPTSSMATLPYAHV
DGSLRALAGQAEGFGRFAIGGLRGPVHYVTSLADDGPGSLREACCMREPLWIVFEVSGTI
HLSSYLRVSSYKTIDGRGQRIKLTGKGLQLKECEHVIVCNLEFEGGRGHDVDGIQIKPKS
KHIWIDRCSLQDYDDGLIDITRESTDITVSRCHFSNHDKTMLIGADSSHITDRCIRVTIH
HCFFDGTIQRHPRLRFGKVHLYNNYTRSWGIYAVCASVEAQILSQCNIYEAGQKKLVFKY
MPEKAADRQEVIAGWIRSEGDMFLNGAQPGLLDAGIQSVFHPLEHYPSWTVEPASLALKE
VLQVCTGWQAITRPADC
NT seq
1134 nt
NT seq
+upstream
nt +downstream
nt
atgggaggctttcggtggctctgctgcttctcgatccaggcgccttcgcaatcgcctcgc
cctcaaagctcgtctccctccccgttccctccgcagccgactcctccgggggctcctccc
tccgcttggatatctgcggctccgacctcctcgatggccactttgccttacgctcacgtc
gacgggagcttgcgtgccctcgctggacaagccgaaggcttcggccgcttcgccattgga
gggctccgtggacccgtccactacgtcacctccttggcagatgacggccccggttcactt
cgtgaggcatgctgcatgagggaaccactctggattgtttttgaagtttcaggaaccatt
cacctttcttcctacctgagggtatcgtcatataagacaatcgatggtcgaggacagagg
ataaagttgactggtaaaggtttacagctgaaagaatgtgaacatgtaattgtttgcaat
ctagaattcgaaggtggcagaggacatgatgttgatggtattcagataaagcccaagtca
aagcatatttggatagaccgctgcagcttacaagattacgatgacggactgattgatatt
actcgtgaaagtactgatataactgtttcaagatgccacttcagcaatcatgacaaaaca
atgcttattggagcagatagcagtcatattactgacagatgtatccgtgttaccattcac
cattgtttcttcgatggaactatacagagacatcctcgacttcgatttggcaaagttcac
ctttataacaattacacgagaagctggggcatatatgctgtctgtgccagtgtagaagct
cagatcttgtctcaatgcaatatttatgaagcaggacaaaagaagttggtattcaagtac
atgcctgagaaggcagccgatcgacaagaggtgatcgcgggatggataaggtctgaaggc
gacatgtttctgaatggtgcccagccaggtttgctggatgctggtattcaaagtgttttc
catcccttagaacattatccgtcatggactgtggaacctgcgtccctggctcttaaagaa
gtcctccaagtatgtactggatggcaagcaatcacaaggccagcagattgttga
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