Zingiber officinale (ginger): 122005512
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Entry
122005512 CDS
T08725
Name
(RefSeq) phytoene synthase 2, chloroplastic-like
KO
K02291
15-cis-phytoene synthase [EC:
2.5.1.32
]
Organism
zof
Zingiber officinale (ginger)
Pathway
zof00906
Carotenoid biosynthesis
zof01100
Metabolic pathways
zof01110
Biosynthesis of secondary metabolites
Module
zof_M00097
beta-Carotene biosynthesis, GGAP => beta-carotene
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00906 Carotenoid biosynthesis
122005512
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
zof01006
]
122005512
Enzymes [BR:
zof01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.32 15-cis-phytoene synthase
122005512
Prenyltransferases [BR:
zof01006
]
Terpene biosynthesis
Squalene/phytoene synthase
122005512
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GFIT
Motif
Pfam:
SQS_PSY
MU2_FHA
Motif
Other DBs
NCBI-GeneID:
122005512
NCBI-ProteinID:
XP_042416484
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Position
7B:21730596..21751009
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AA seq
373 aa
AA seq
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MSSSSLICVVSPKVPPFVETKSRLRRTRGGSVISASLRVAVPPPSSEKVVYEVVLRQAAL
VGEARRRTPAAVEVPIAPLRGDLLDEAYERCGEVCAEYAKTFYLGTLLMTPERRKAIGAI
YVWCRRTDELVDGPNASHITPTALDRWQHRLEDLFDGRPYDMYDAALSDTVSKYPVDIQP
FKDLIEGMRMDLRKSRYNNFDELYLYCYYVAGTVGLMSVPVMGIAPDSKASIESVYNAAL
ALGIANQLTNILRDVGEDSRRGRVYLPQDELARADLSDDDIFNGKVTERWRSFMKGQIKR
ARMFFDEAEKGIYELNSASRWPVLASSQLYRQILDSIEANDYDNFTKRAYVGKAKKLISL
PIAYAKALASLSR
NT seq
1122 nt
NT seq
+upstream
nt +downstream
nt
atgtcttctagctcacttatctgcgtcgtttcgcccaaagtgccgcctttcgtcgagacg
aagagtcgattgcgaagaaccagaggtggctcggtaatctccgccagtctgcgggtggcc
gtgccgcctccctcctccgagaaggtggtgtacgaggtcgtgctccgccaggcggcattg
gtgggcgaggcgcggaggaggacgccagcggccgtcgaggtccccatcgcaccgctgcga
ggagacctcctcgatgaggcctacgaacgctgcggcgaggtctgcgccgagtatgccaag
accttctatctcggaacattgcttatgacaccagagagaagaaaggctatcggggcaatc
tacgtatggtgcagaaggaccgatgaactagtcgatggccccaatgcttcccatataaca
cccactgctctggatcgctggcagcacaggttggaagatctattcgatggtcggccttac
gatatgtatgatgccgctctatcagacactgtatcaaaatatccagtagacattcagcca
ttcaaggatttgatcgaaggaatgagaatggatctgcggaaatcgcgatacaataacttt
gatgagctctatctctactgttactatgtggctggtacggtcggcctaatgagtgttcct
gtaatgggaattgctccagattcaaaagcctccatagagagtgtctataacgcagcacta
gctcttggcattgctaatcagttgaccaacatactcagggatgtaggagaagactcgaga
agggggagagtgtaccttccgcaagacgaattagctcgagctgatctatcagatgatgat
attttcaatggaaaagtgaccgagagatggaggagcttcatgaagggtcaaattaagcga
gccagaatgttctttgacgaagctgagaagggcatctacgagttgaattcagctagcaga
tggccggttttggcctcctcgcagctttatcgacagatccttgattccattgaagccaat
gactacgacaacttcacgaagcgtgcctacgtaggaaaggcgaagaaattgatctcattg
cccatagcatatgccaaggcattggcgagcctttcaagatag
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