Zingiber officinale (ginger): 122005546
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Entry
122005546 CDS
T08725
Name
(RefSeq) serine/threonine-protein phosphatase PP2A catalytic subunit isoform X1
KO
K04382
serine/threonine-protein phosphatase 2A catalytic subunit [EC:
3.1.3.16
]
Organism
zof
Zingiber officinale (ginger)
Pathway
zof03015
mRNA surveillance pathway
zof04136
Autophagy - other
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
122005546
09140 Cellular Processes
09141 Transport and catabolism
04136 Autophagy - other
122005546
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
zof01009
]
122005546
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
zof03019
]
122005546
04131 Membrane trafficking [BR:
zof04131
]
122005546
03036 Chromosome and associated proteins [BR:
zof03036
]
122005546
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
zof04147
]
122005546
Enzymes [BR:
zof01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.16 protein-serine/threonine phosphatase
122005546
Protein phosphatases and associated proteins [BR:
zof01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Catalytic subunits
122005546
Messenger RNA biogenesis [BR:
zof03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
122005546
Membrane trafficking [BR:
zof04131
]
Autophagy
Other autophagy associated proteins
Others
122005546
Chromosome and associated proteins [BR:
zof03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
122005546
Exosome [BR:
zof04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
122005546
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Metallophos
STPPase_N
Motif
Other DBs
NCBI-GeneID:
122005546
NCBI-ProteinID:
XP_042416556
LinkDB
All DBs
Position
7B:complement(23362728..23370581)
Genome browser
AA seq
314 aa
AA seq
DB search
MSASPVPASDTHGNLDEQIAQLMQCKPLSEQEVRVLCEKAKEVLMEENNVQPVKSPVTIC
GDIHGQFHDLAELFRIGGKCPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYPQRITILR
GNHESRQITQVYGFYDECLRKYGNANVWKIFTDLFDYFPLTALVESEIFCLHGGLSPSIE
TLDSIRNFDRVQEVPHEGPMCDLLWSDPDDRCGWGISPRGAGYTFGQDISEQFNHTNNLK
LIARAHQLVMEGYNWGHEQKVVTIFSAPNYCYRCGNMASIMEVDECKGQTFIQFEPAPRR
GEPDVTRRTPDYFL
NT seq
945 nt
NT seq
+upstream
nt +downstream
nt
atgagcgcgagtcccgtaccggcttcggacacccacggcaacctggatgagcagatcgcg
cagctcatgcagtgcaagccgctctccgaacaggaggttagagtgctttgtgaaaaggct
aaggaggttttgatggaagaaaacaatgttcagccagtgaagagccctgtgactatctgt
ggtgatattcatggtcaatttcatgatctggcagagctatttcgaattggtggaaagtgt
ccagataccaattacttgtttatgggcgattatgtggatcgtggatactactctgtcgag
acagttacgcttttggtggctctcaaggtgcgttatcctcagcgaatcactattctcaga
ggaaaccatgagagtcgtcagattacccaagtttatggattttatgatgaatgcctgaga
aaatatggcaatgcaaatgtatggaagatcttcaccgatctttttgattatttcccattg
acggcattggttgaatcagaaattttctgtctacatggtggattatctccatctatcgaa
actcttgacagcataagaaactttgatcgtgtccaagaagttcctcatgaagggcccatg
tgtgatcttttgtggtctgatcctgatgatagatgtggttggggtatttctccacgtggt
gctggttacacttttggccaagatatatctgagcaattcaaccataccaacaatctcaaa
ttaatagccagagctcatcaactggttatggagggatataattggggacatgaacaaaag
gtggtcaccatatttagtgcaccaaattattgttatcgatgcggaaacatggcttccata
atggaagttgatgaatgtaaagggcagacatttattcagtttgaaccagcacctaggaga
ggagagcctgatgtaacccgcaggactcctgactactttctgtaa
DBGET
integrated database retrieval system
