Zingiber officinale (ginger): 122005690
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Entry
122005690 CDS
T08725
Name
(RefSeq) long chain acyl-CoA synthetase 1-like isoform X1
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
zof
Zingiber officinale (ginger)
Pathway
zof00061
Fatty acid biosynthesis
zof00071
Fatty acid degradation
zof01100
Metabolic pathways
zof01212
Fatty acid metabolism
zof04146
Peroxisome
Module
zof_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
122005690
00071 Fatty acid degradation
122005690
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
122005690
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
zof01004
]
122005690
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
zof04147
]
122005690
Enzymes [BR:
zof01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
122005690
Lipid biosynthesis proteins [BR:
zof01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
122005690
Exosome [BR:
zof04147
]
Exosomal proteins
Exosomal proteins of breast milk
122005690
Exosomal proteins of breast cancer cells
122005690
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
RRM_PARP14_2
Motif
Other DBs
NCBI-GeneID:
122005690
NCBI-ProteinID:
XP_042416748
LinkDB
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Position
7B:39013679..39019319
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AA seq
662 aa
AA seq
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MANFTVQVESGRRGKDGSPSVGPVYRSILAKDAFLSLEPGSNTSWDVFRVAAEKFPMNRM
LGWREMKNGKAGPYLWKTYEEIYQEVVQVGSALSHLGVKPGSKIGIYSANCPNWIVVMEA
CNGYTFICVPLYETLGEGAVEYIVEHAEVVVAFVQETKINRILSKCTSTKHLKVIVSFGS
RTMEQNAAATNIGMKLYSWDEILEMGKENTSDPLPPKPLDICTIMYTSGTSGDPKGVVLT
HECLATYVAGTDLFMKQFEDKMTTDDVYLSFLPLAHILDRTIEEYFFHNGASVGYYQGDI
QALRDDLMELKPTLFAGVPRVFEKVYEGVLKAVSELLPHRRMIFNALYKYKLYWMRLGYS
HKNASPLADLLAFRKVKDRLGGRVRLIISGGAPLNTEIEEFLRVTSCAYVTQGYGLTETC
GVSTVGVPDDMSLVGTVGIAATNTEVRLEEVPEVGYDPLSTPSCGEVCVRGTTIFTGYYK
DPELTKQVMIDGWFHTGDIGEMRPDGVLKIIDRKKNIFKLSQGEYVAVEFLEKTYKVSPI
VEDIWVYGNSFKSVLVAVVTPHEDSVKRWARANGHEGSLYDLCQLGDLKKYILEELKKVA
ETNKLRGFEHIKGIVVDPLPFDIERDLITPTMKKKRAQMLKFYQSDIDKLYQNISAEGKR
YA
NT seq
1989 nt
NT seq
+upstream
nt +downstream
nt
atggcaaatttcactgttcaagtggagagtggaagaagagggaaagatgggagtccctca
gttggtccagtgtaccgaagtatattagcgaaggatgcgtttctgtctcttgaacctggc
tcgaacacctcatgggatgtcttcagggtggcagcagagaagtttccaatgaacaggatg
ctgggatggcgtgagatgaaaaatgggaaggcagggccttatttatggaaaacatacgag
gagatttaccaagaggtggtacaagttggttctgcactaagtcatcttggtgtcaaacct
ggttctaaaatagggatctattcagcaaactgtcctaattggatagtggtcatggaggct
tgcaacggatacacttttatttgtgttccactctatgagacactgggtgaaggagctgtt
gaatacattgtagagcatgctgaagttgttgttgcttttgtccaggagacgaaaataaac
cgaattctgtccaagtgcacatccactaaacatctcaaagtaattgtttcatttggttcg
agaactatggaacaaaatgctgctgctacaaacatcggaatgaaactgtactcttgggat
gaaattcttgagatgggaaaagaaaacacatcagatccgctgccaccaaaacctcttgat
atatgtacgataatgtacacgagtgggactagtggagatcctaaaggtgtagtgctgact
catgaatgtcttgcaacatatgtagcaggaacagacctattcatgaagcaatttgaagac
aagatgacaacagatgatgtctatctttcttttcttccccttgctcacattctggaccga
acaattgaagagtattttttccacaatggggcttctgttggctattatcaaggggatata
caagctttgagggatgaccttatggagctgaagccaactctcttcgcaggggttcctagg
gtttttgaaaaagtttatgaaggtgtcctaaaggcagtgtcagaactcctaccacataga
aggatgatattcaatgccttatacaaatataaactatattggatgagattaggatattca
cataagaatgcttcacccttggcagatttattggcttttcgcaaggtgaaggataggcta
ggaggccgtgttcgccttataatatcgggaggtgctccattaaatactgagattgaggag
ttcttgcgagtcactagttgtgcttatgttacccaaggctatggtttaacagagacatgt
ggcgtcagcacagttggagttcctgatgacatgtcattggttggcaccgttggcattgca
gctaccaacaccgaggtgcgccttgaagaagttccagaagtgggatatgatccgttgtcg
actccctcttgcggtgaagtgtgtgtaagagggacgacaatcttcacagggtactacaaa
gaccctgagttaacaaagcaagtgatgatagatggctggtttcatacaggggatattgga
gagatgagacctgatggggttttgaagattatagacagaaagaagaacatatttaaacta
tcacagggtgaatatgttgcagttgaattcctagagaaaacatataaagtttctccaatt
gtcgaagatatttgggtttatgggaacagcttcaagtctgtgctcgtagcagtggtcacg
ccccatgaggacagtgtgaaaagatgggcacgagcaaatggccatgaaggatctctatat
gacctatgccaactcggagacctgaagaaatatattcttgaagagttgaagaaagttgct
gaaactaacaagcttagaggttttgagcacattaaaggtatcgtagtggatcctttgcca
tttgacattgaacgagaccttattactcctacaatgaagaagaaaagagcacaaatgctc
aagttttatcagtcagatatcgacaaactttatcaaaatatttcagcagaaggcaaaaga
tatgcctga
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