Zingiber officinale (ginger): 122005737
Help
Entry
122005737 CDS
T08725
Name
(RefSeq) pseudouridine-5'-phosphate glycosidase-like isoform X1
KO
K16329
pseudouridylate synthase [EC:
4.2.1.70
]
Organism
zof
Zingiber officinale (ginger)
Pathway
zof00240
Pyrimidine metabolism
zof01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09100 Metabolism
09104 Nucleotide metabolism
00240 Pyrimidine metabolism
122005737
Enzymes [BR:
zof01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.70 pseudouridylate synthase
122005737
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Indigoidine_A
Motif
Other DBs
NCBI-GeneID:
122005737
NCBI-ProteinID:
XP_042416829
LinkDB
All DBs
Position
7B:49961936..49995653
Genome browser
AA seq
407 aa
AA seq
DB search
MPELPPLRRPPLPRCPVPRESHFLSFSRRFDSARERRPCGALTSASLAEHWELHAVWSRM
GQNDSILGSLKIAPDVNDALLRGNPVVALESTIISHGKHAMFLSMLTLYNTNCRNINAHG
LAWGSFHNLQTAKEVQAILKANGAVPATIAILDGVPCIGLNNEQLERLAKLGSKAQKTAR
RDISHVVASGGNGATTVSATMFFASKVGIPVFVTGGVGGVHRHAETTMDISSDLTELGKT
PMAVISAGVKSILDIPRTLEYLETQGVTVAVYQSNDFPAFFSGSSGCKAPCRLDTPEQCA
RLIYANMKLGLGSGMLIAVPAPEEHVAAGNAIESAIKKALEEAKVNNVAGNAATPFLLSR
VNELTGGASLLANIALVKNNALIGARIAVALADLRRSLKNGQPRSAL
NT seq
1224 nt
NT seq
+upstream
nt +downstream
nt
atgccggagcttcctcctctgcgacgccctcctctgccgcgatgtcctgtgccgcgggag
tctcacttcctttctttctctcgccgctttgattctgcgagagagcgtcggccctgtggt
gctctcacctctgcaagtctggccgaacactgggaactacatgctgtgtggtccaggatg
gggcaaaatgactcaatcttgggaagtctcaaaattgctccagatgttaatgatgctctt
ctacgtggaaatccagttgtggcactagaatcaacaattatttctcacggtaaacatgcc
atgtttttaagcatgttgacactctacaatacaaattgcaggaacattaatgctcatggc
ttagcttggggaagtttccataatcttcagactgctaaagaggtccaagctatcctgaag
gcaaatggtgcagttcctgcgactattgccattttagatggagttccatgcataggtctg
aataatgaacaactagaaaggctggcaaagcttggaagcaaagctcagaaaacagctcgc
agagatatctctcacgttgttgcatctggtggtaatggcgcgacaacagtgtctgcaaca
atgttttttgcttcaaaggttggcataccagtttttgttactgggggggttggaggagta
catagacatgcggaaacaacaatggatatatcatctgatctaactgaacttggcaaaact
ccgatggcagtcatttcagctggagtaaagtccatattagatattcctagaacccttgaa
tatctggaaactcaaggagtgacagttgctgtctaccagtctaatgactttcctgcattt
tttagtggaagtagtggatgtaaggcaccttgtcgtcttgatactccagaacagtgtgct
aggctcatatatgcaaacatgaaattaggacttggaagtggaatgctaattgctgtccct
gccccagaagaacatgttgctgcaggaaatgccatcgaatctgcaattaaaaaagcatta
gaagaagcaaaggtaaataatgtggcaggaaatgccgccacgccttttctgctttctaga
gtcaatgagttaactgggggtgcatcactacttgctaatattgcacttgtaaagaataat
gcattgataggtgcaagaattgctgttgctcttgctgatcttagaagaagtctcaaaaat
ggtcaaccacggtcagcattataa
DBGET
integrated database retrieval system
