Zingiber officinale (ginger): 122005903
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Entry
122005903 CDS
T08725
Name
(RefSeq) brefeldin A-inhibited guanine nucleotide-exchange protein 5-like
KO
K13462
guanine nucleotide-exchange factor
Organism
zof
Zingiber officinale (ginger)
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09190 Not Included in Pathway or Brite
09193 Unclassified: signaling and cellular processes
99995 Signaling proteins
122005903
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec7
Sec7-like_HUS
DCB
Sec7-like_HDS
BIG2_C
Mon2_C
HEAT_DAAF5
Motif
Other DBs
NCBI-GeneID:
122005903
NCBI-ProteinID:
XP_042417084
LinkDB
All DBs
Position
7B:64427141..64446695
Genome browser
AA seq
1756 aa
AA seq
DB search
MASAAAAGFITRSLEAMLKECTGKKFPNLQSSVQACLDNMKETKQEVASDKKHAASTAEE
ESGSDGGDASLKEGDGPVTSTENDCVTKSQESSEPIIAALANAGHTLDRAQTDLILKPLR
LAFETKNIKLLELALDCIHKLIAYDHLEGDPGLEGGQNATLFTDILNMVCGCVDNSSSDS
TIVQVLQALLTAVSSTRFRVHGEPLLGVIRVCYNIALNSKSLVNQATSKAMLTQMISIVF
RRMETDQVPVSSSIVHAAASNTSAETVEISSNEKDEKNSVADALSKKHENDTSPSLEEFQ
NLAGGADIKGLEAVLDQAVQLEDGKKVSEGISVESMTVMQNDALLLFRTLCKMGMKEESD
EVTTKTRLLSLELLQGLLEGVDHSFTKNFHFIDSVKAYLSYALLRASVSSSPQVFQYATG
IFAVLLLRFRESLKGEIGIFFPLIILKSLESNESTLSQRTSVLRMLEKVCKDSQMLADIF
VNYDCDLQAPNLFERTVNALSKIAQGTVTTDPNSVTASQIASAKGSSLQCLVSVLKSLVD
WEKLKRESDKHTNIIRSLEEEVSGRDVASINEQKNTDDGLNQFEKAKAHKSTMEAAILEF
NRKPAKGIEFLLANKLVESKASAIAQFLKSTPNLDKAMIGEYLGQHEELPLSVMHSYVDS
MKFSGLKFDTAIREFLTGFRLPGEAQKIDRIMEKFAERYCADNPGLFKNADTAYVLAYAV
IMLNTDAHNPMVWPKMSKSDFIRMNSVSDVEECAPQELLEQIYDSIVKEEIKMKDDTPDA
AKSSRQRPETEEQGRLVNILNLTLPKKKNGFDTKAESEKIKKQIQNLFKNKGEKRGVFYT
AQLVELVRPMLEAVGWPLLATFSVTMEEGDNKPRVILCMEGFRAGIHLTRVLGMDTMRYA
FLTSLVRFTFLHAPKEMRSKNVEALRTLLILCDIDTDSLQDTWNAVLECVSRLEYITSTP
SIAITVMQGSNQISRDAVLQSLKELAGKPAEQVFVNSVKLPSDSIVEFFTALCGVSAEEL
KQTPARVFSLQKLVEISYYNMARIRLVWARIWSVLAQHFISAGSHREEKVAMYAIDSLRQ
LGMKYLERAELTNFTFQNDILKPFVILMRNSHNEKIRSLIVDCIVQMIKSKVGSIKSGWR
SVFMIFTAAADDELESIVDSAFENVEQVILEHFDQVVGDCFMDCVNCLIRFANNKISPRI
SLKAIALLRICEDRLAEGFIPGGALKPVDGGLESSFDITEHYWFPMLAGLSDLTLDSRLE
VRNCALEVLFDLLNERGRKFSSAFWESIFHRVLFPIFDHVRHAGRDGIASTDEEWLRETS
IHSLQLLCNLFNTFYTEVSFMLPPLLGFLLDCAKKTDQSVVSISLGALVHLIEVGGHQFN
DSDWDTLLKSIRDASYATQPLELLNSLGFVNSNNQTVVSKDSEAKDSDSPFKTLDDRKEE
GVLENRYLSINPEDSGQAISTTKDHQGSSNLPTNLEESNGGSPKPAEASDFQRSQTFGQR
FMDNLLLRNLTSKPKNRTIDAGSASPTKSIDVAESIPDDSDDEENSMTETIKGKCITQLL
LLGVIDIIQKKYWNKLNTHHKIAVMDILLSLVEFASTYNSPSNLIIRMQYLPTERLPLNL
LRQEMRGTSIYLEILHKSTGTDNNNNSHEPLNSEEKLLSAAEEKLVSFCGQILKEASDLK
PSTGEAGSANIHRVLDLRAPVIVKVLKGMCSMNNLIFRRHLREFYPLITKLVCCDQMEVR
GAVGDLFSTQLTPLLP
NT seq
5271 nt
NT seq
+upstream
nt +downstream
nt
atggcgagcgccgcagctgctgggttcatcaccaggtccctcgaggccatgctcaaggag
tgcacggggaagaagttccccaacctgcagagctccgtgcaggcttgtctagacaacatg
aaggagactaaacaggaagtggcttctgacaagaaacatgctgcaagcacggctgaggaa
gaaagtggcagtgatggtggtgatgcctcattgaaagaaggggatggtccagtcacgtct
actgaaaatgattgtgtcactaagtctcaggagagcagcgaacctattatagcagcttta
gcaaatgctgggcacaccttagacagggctcaaactgaccttatcttaaagccactgagg
ctcgcatttgagaccaaaaatataaaacttttggagcttgcgcttgactgtattcataaa
cttatagcttatgatcatttagagggtgatcctggactggaaggtggccaaaatgctact
ttatttacagatattctcaacatggtctgtggctgtgttgataattcatcatctgatagt
accatagtacaagttttgcaggcacttctaactgctgtatcatcgacgagatttagagtt
catggagaacccttgctgggagtcattagagtatgctataacattgctctcaacagtaag
agtttagtaaatcaggccacgtcaaaagcaatgctaacccaaatgatcagtattgtattt
cgacgaatggaaactgatcaggttcctgtatcatctagtattgtgcatgctgcagctagc
aacactagcgctgagacagtagaaatatctagtaatgaaaaagatgagaaaaatagtgtg
gcagatgcattatccaagaagcatgaaaatgacacctctccatctttagaggagtttcag
aatttggctggtggtgctgatatcaagggtttagaggctgttcttgaccaagctgttcag
cttgaggatggaaagaaagtttcagaaggaattagtgtagagagcatgactgtgatgcag
aatgatgctttgttgctgtttcgaacactgtgcaagatggggatgaaagaagagagtgat
gaggtgaccaccaagacaaggctgttgtctcttgagcttttgcagggtttgctggaagga
gtggaccattccttcacaaaaaacttccattttattgactctgttaaggcatatctttct
tatgctttattgcgagcttctgtttcttcgtctcctcaggtctttcagtatgcaactgga
atatttgctgttcttttgcttcgttttagggaaagtcttaagggagaaattggcatcttt
tttccattgataattttaaaatcactggaaagcaatgagagtacacttagccaaagaaca
agtgttctccggatgcttgagaaagtgtgcaaggactcacaaatgcttgcagacatattc
gtgaactatgattgtgatcttcaagcaccaaaccttttcgaacgcacggtaaacgcgctg
tcaaagatagcacaaggaactgtaactacagatccaaactcagttactgcttcacagatt
gcttctgctaaaggttcatctcttcagtgcttggtgagtgtgctcaaatcactggttgat
tgggagaagcttaaacgagaatccgataagcacactaatataatccggtctcttgaagag
gaagtttcaggtagagatgttgcttcaattaatgagcagaagaatactgatgacggatta
aatcaatttgaaaaggctaaagctcacaaatccacaatggaagcagccatcttagagttc
aaccgaaagcctgcaaaagggatagagtttttattggctaacaagttggttgagagtaaa
gcttctgcaatagctcaattcctgaagagcactcctaatttggataaggcaatgattggt
gaatatttaggccagcatgaggaactccctctttctgttatgcattcatatgttgattcc
atgaaattctcaggattgaagtttgatactgcaattcgtgaattcttaactggatttcga
cttcctggtgaagcacagaaaattgataggatcatggaaaagtttgctgagcgttactgt
gctgataatcctggccttttcaagaatgcagatactgcttatgttcttgcatatgcagtt
ataatgttaaataccgatgctcacaatccaatggtttggccaaaaatgtcaaaatctgat
tttatacgtatgaattctgtcagtgatgtggaagagtgtgcaccacaggagctcctagag
cagatatatgattcaattgttaaagaagagataaagatgaaagatgatacacctgatgca
gctaaaagcagcagacagagaccagaaacagaagagcaaggccgccttgtcaatattctc
aatttaactcttcctaagaagaaaaatgggtttgatactaaagcagaaagtgagaaaata
aagaaacaaatacagaaccttttcaaaaataaaggcgaaaaaagaggtgtcttttatacc
gctcagctggttgaactagttagaccaatgcttgaagctgttggatggcctcttctcgca
acattttctgtaacaatggaggaaggggataataaacccagagttattctttgcatggag
ggtttcagagctggcatacatctaacacgagttcttgggatggatacgatgcgttatgct
ttcctaacatcattagtacgatttacattcttgcatgctccaaaggagatgcgaagtaaa
aatgtggaagcattgcggacactgcttattctatgtgatatagacactgattcactacaa
gacacctggaatgctgtcttggaatgtgtatcacggctagaatatatcacttcgacccca
tccattgctataactgtgatgcagggttcaaatcaaatatcaagggatgcagttcttcag
tctcttaaagagttggctggaaaaccagcagagcaagtctttgtgaacagtgtaaaattg
cctagtgattcaattgtggagttctttactgctctttgtggtgtttctgctgaagaattg
aaacaaacacctgcccgagtcttcagcttacagaagcttgttgagataagctattacaat
atggctcgcattcggctggtatgggctagaatatggtctgtcttggcccaacacttcatt
tccgctggtagccatcgtgaggaaaaagttgctatgtatgccatcgattcactgagacaa
cttggtatgaagtatctggagcgtgctgagctgaccaacttcaccttccaaaatgacatt
ttgaaaccttttgtcattcttatgcggaatagccacaatgaaaaaatccgcagtctaatt
gttgattgcattgttcagatgattaaatcaaaggtgggtagcattaaatcaggctggcgg
agtgtgttcatgatcttcactgcagcagcagatgatgaattggaatcgattgttgatagt
gcatttgaaaatgttgaacaagttatcttggaacactttgaccaggttgttggtgactgc
tttatggattgtgtgaattgcctcattcgttttgcgaataacaaaatttctcctcgcata
agcttgaaagcaattgctcttctccgtatatgtgaagatcggcttgctgagggatttata
cctggtggagccctgaaaccagtggacggtgggctagaatcaagctttgatataacagag
cattactggtttcctatgttagctggattatctgatctaacattggactccagattagaa
gttcgaaactgtgcactagaggtgctgtttgatttgctgaatgagagaggaaggaaattt
tcctctgctttctgggagagtatttttcatcgggtccttttcccaatatttgaccatgta
cgacatgctggtagagatggtattgcctccactgatgaggaatggcttagggaaactagc
atccattcactccagttgctctgcaaccttttcaatactttctatacggaagtttctttt
atgctcccaccacttctgggatttcttcttgattgtgccaagaaaacagatcagagcgtg
gtttccatttcactgggagcccttgtacatcttattgaggttgggggtcatcaatttaat
gatagtgattgggatactttgttaaaaagcattagagatgcatcctacgcaactcaacct
cttgagcttctcaattctttgggatttgtaaactcaaacaaccagacagtcgtatcaaaa
gattcagaagctaaagacagtgacagtccatttaaaacccttgacgataggaaggaagag
ggagtcttggagaaccgatacttatctattaatcctgaagactctgggcaagcaatcagc
acaactaaggatcatcagggtagtagcaatctcccaaccaacttagaggaatctaatggt
ggctcacctaagcctgctgaagcttcagatttccagcgtagtcaaacatttggtcaaagg
tttatggataatcttcttcttcgaaatctcacgtctaaaccaaagaaccgcacaattgat
gctggctcagcttcacctacaaagagtattgatgtcgcagaatccattcccgatgatagt
gatgatgaagaaaattcaatgacggagactattaaaggaaaatgcattacccaactacta
ttattaggtgttattgatatcatacagaagaaatactggaacaagttgaacacccatcat
aagatcgcagttatggacatcttgctgtctcttgtggagtttgcttctacatataattca
ccatcaaatctaataatacgcatgcagtacctacccacagaaagactaccactaaatctt
ctccgccaggaaatgagaggaacttccatttatttagaaattttacacaagtcaactgga
acagataataataacaacagtcatgaaccgctgaattctgaagagaagctcttaagtgca
gcggaggagaaactggtctctttctgtggtcagattttaaaggaggcttctgatctcaaa
ccaagtacaggggaggctggtagcgcaaacattcatcgagtacttgacctgagagcacca
gttattgttaaggtacttaaaggaatgtgctctatgaataacctcatcttcagaaggcac
ctcagagagttctatcctctaatcacgaaacttgtctgttgtgatcagatggaggttcgt
ggagccgttggagatctcttcagtacacagctcactccccttctgccataa
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integrated database retrieval system
