Zingiber officinale (ginger): 122005906
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Entry
122005906 CDS
T08725
Name
(RefSeq) DNA topoisomerase 2-like
KO
K03164
DNA topoisomerase II [EC:
5.6.2.2
]
Organism
zof
Zingiber officinale (ginger)
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
zof03032
]
122005906
03036 Chromosome and associated proteins [BR:
zof03036
]
122005906
Enzymes [BR:
zof01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
122005906
DNA replication proteins [BR:
zof03032
]
Eukaryotic type
DNA Topoisomerases
122005906
Chromosome and associated proteins [BR:
zof03036
]
Eukaryotic type
Chromosome condensation proteins
Other regulators of chromosome condensation
122005906
Centrosome formation proteins
Centriole proteins
122005906
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
TOPRIM_C
DNA_gyraseB
Toprim
HATPase_c
VAPB_antitox
Motif
Other DBs
NCBI-GeneID:
122005906
NCBI-ProteinID:
XP_042417087
LinkDB
All DBs
Position
7B:64636114..64642300
Genome browser
AA seq
1440 aa
AA seq
DB search
MAAAMKLPLQSSTAHNAALGAATAAGKKTIEQIYQKKTQLEHILLRPDTYIGSVEKHTQS
LWVFENGEMVYRPVTYVPGLYKIFDEILVNAADNKQRDPSMDAVKVVIDVEANLISIYNN
GDGVPIEIHQEEKVYVPELIFGHLLTSSNYDDNVKKTTGGRNGYGAKLANIFSTQFVIET
ADGRRLKKYKQVFNDNMSEKSEPSITKCKEGENWTKVTFRPDLAKFNMTHLEEDVVALMK
KRVVDVAGTLGKSVKVELNGQRVPVKSFSDYVNLYLKSASKNKSEPLPRIAEKVNDRWEI
CVSLSEGQFQQVSFVNGIATIKGGTHVEYVTTQITNHIISIVNKKNKNANLKAHNVKSHL
WVFVNALIDNPAFDSQTKETLTTRQGSLGSKCELSQDFLKKVAKSGVVNTLLTWADFKQS
KELKKTDGAKRQRITGIPKLEDANDAGGRNSDKCTLILTEGDSAKALAMSGISVVGRNYY
GVFPLRGKLLNVREANHKQIMDNAEIQNIKQILGLQHGKEYDSAKGLRYGHLMIMTDQDH
DGSHIKGLLINFIHTFWPSLLKVPSFMVEFITPLLKATNNRTKTVLSFYSMPEFEAWKES
LGGNSNGWSIKYYKGLGTSKSEEGKEYFRNIGMHKKEFVWMDAQDGESIELAFSKKKIEA
RKNWLRQFEPENYLDQSETLIKYSDFINKELILFSRADLQRSIPSMVDGLKPGQRKILFC
AFKRNFVKQAKVAQFIGYVSENSAYHHGEQSLATTIIGMAQDFVGSNNINLLQPEGQFGT
RHQGGKDHASARYIFTCLAPITRFLFPKDDDILLDYLNEDGQSIEPSWYMPIIPLVLVNG
SEGIGTGWSSYIPNYNPKDIVANVKRLLNNEPMQPMDPWYRGFKGRIEKSATKEGGLTYT
ITGLVEEIDSTTLRVTELPVRRWTQDYKEFLESSMTGNDKIKEPFIKDYREHNDDKTVHF
EVTVTEENMNIARQEGLEKKFKLTTTISTTNMHLFDSKSVIKKYDSPEQILEEFFALRFV
YYEKRKKALLNNLELDLLKLDNKARFILGVVRDEIVVNKRKRADLFLELQQKGFTPFPKK
TKGIDAAVAGASEEDGEQEESPQPGKGGALASDYDYLMSMRIDSLTEEKVQELCAQKEKL
EAEVDELRRTSPQTLWLRELDALEEELDKLDQKEAEAEGARKEMRMNHIAGVAPSKQVAK
KPRKNTATKLSVSATTTDAGGQKKSKKAPAKKQTVEESDEDEEILALKDRLAAYNLDSSP
DNGAMETDTVVSDQGKAKKQPSRNAAAKKATYVLSSDEDDEPEQQQRLMPTIEEADDVVE
EASVKAVKGRKPKNETGKATRKRGPAQASKATTTSQKVRKMRASPFNKKSGSVLSKPRNE
DSSSGSSSNDATAAAARTRPKRESRTKAAVYVESDSEGETNEVGDDDDDATEDSDFQDED
NT seq
4323 nt
NT seq
+upstream
nt +downstream
nt
atggccgccgccatgaagcttcccctccagtcgagcaccgctcacaacgccgccctggga
gccgctaccgctgcaggaaagaagaccatcgagcagatctaccagaagaagacgcagctg
gagcacatcctcctccgccccgacacctacattggatccgtcgagaagcacacccagagc
ctctgggtcttcgagaatggcgagatggtctaccgtcccgtcacctacgtccccggcctc
tacaagatcttcgacgagatcctcgtcaacgccgctgacaacaagcagcgcgacccctcc
atggacgccgtgaaggtcgtgatcgacgtcgaggccaacctaatcagcatctacaacaac
ggagatggtgtgccaatcgagatccatcaggaggagaaggtctacgtgccggagttgatt
ttcggccaccttcttaccagcagcaactacgacgacaacgtcaagaagactaccggcggg
cgaaacgggtacggtgccaagctcgccaacatattctccacccagtttgtcatcgagacc
gctgacgggcggaggctgaagaagtacaagcaggtgtttaacgataacatgagtgaaaaa
tctgagccctcaattacgaagtgcaaggaaggggaaaactggactaaggtcacttttagg
ccagatttggccaaattcaacatgacgcaccttgaagaagatgtggttgctctcatgaag
aagagagtagttgatgtagctggaactctcggtaaatctgtcaaggtggagttgaatgga
caacgagtacccgtgaaaagtttctccgattatgtcaacctgtaccttaagtccgcatca
aaaaataaatctgaaccacttccaaggattgcagagaaggtaaatgacagatgggaaatt
tgcgtcagtctaagtgaagggcaattccagcaggtcagctttgtaaatggtatagccaca
atcaaaggtggaactcacgttgagtatgtcactactcaaatcacaaatcacataatcagc
atagtgaacaagaaaaacaagaatgctaaccttaaagcacataatgtgaaaagtcatttg
tgggtttttgtcaatgcactcattgacaaccctgcctttgattctcaaaccaaagaaacc
ttgaccactcgacaaggaagccttgggtcgaaatgtgagctttcacaggatttccttaaa
aaagttgccaagtctggagttgtaaacacgctgctcacatgggctgattttaagcaaagc
aaagaattgaagaagacagacggtgccaagaggcagcgaattacaggcatccctaagctt
gaggatgctaatgatgctggaggaaggaactcagacaagtgcacactgatattgactgaa
ggagattcagccaaggctcttgctatgtctggcatctcggtggtaggcaggaactattat
ggtgtgtttccactaagggggaaactgctgaatgtcagagaagcgaaccacaagcaaatc
atggacaatgctgaaatccagaacataaagcaaattcttggtttgcagcacggaaaggag
tatgatagcgctaaagggttgagatatggccatctaatgataatgacagatcaggatcat
gatggttcccacatcaagggactgctcattaactttatccatacattttggccttcattg
ctaaaagtgccctcttttatggttgaattcataactccacttttgaaggctactaataat
agaaccaaaactgtcctctcattctattccatgcccgaatttgaagcgtggaaagaaagt
ctgggaggaaattcaaatggttggtcaatcaagtactataaggggttaggcacaagtaaa
tcagaagaaggaaaagagtactttaggaacataggcatgcataaaaaggaattcgtatgg
atggatgcgcaggatggtgaatcgattgagttagcatttagtaagaaaaagattgaggct
agaaaaaattggcttcgccaatttgagcctgagaattatctcgatcaatcagaaacgctc
attaaatacagtgatttcatcaacaaggaactgattctattctccagagctgatctacaa
agatcaataccttcaatggttgacggcttgaaaccaggccaaaggaaaattttgttctgt
gcattcaagagaaattttgtcaagcaagccaaggttgcccagttcattggctatgtctcc
gagaactccgcctatcatcatggcgaacagagccttgctactaccataattggcatggcc
caagattttgtggggagtaacaacataaatcttttgcaacctgaagggcaatttggcacc
agacaccagggcggcaaagaccatgccagtgcaagatacattttcacttgcttggctccc
atcactaggtttttgttcccaaaggatgatgatattcttctggactacttaaatgaggat
gggcaatcaatcgaaccctcttggtacatgccaatcatccctttggttctggtcaacgga
agcgaagggattggaactggatggagttcttacattcctaactacaatccaaaagacatt
gttgccaatgttaagcgattgttgaacaatgaaccaatgcagcctatggacccctggtac
cgaggatttaagggtcgtatagagaaatccgcaacgaaggaaggtggtttgacctacaca
ataaccggtctcgtagaggaaattgatagcacaacactcagggtaacggagttgcccgtt
cgtagatggacccaggattacaaggaatttctcgagtcttcgatgactgggaacgacaag
atcaaggaacccttcatcaaggactaccgggaacacaatgacgacaaaacagtacacttc
gaggttactgtgactgaggaaaatatgaacattgcgcggcaagaagggcttgagaaaaag
tttaagctgacaactaccattagcaccaccaacatgcacctgttcgattcaaaatccgtc
attaagaaatatgatagtcccgagcagattcttgaggagttctttgcactgagattcgta
tattatgagaagagaaagaaagctctgctgaacaatcttgagttggatctgctgaagttg
gataacaaagcgaggttcatcctgggcgtagttcgagacgagatagtagtcaacaagcga
aagagagcagatttattcctcgagctgcagcagaagggcttcactcccttcccaaagaaa
acaaaaggcatcgacgctgctgttgcgggagccagcgaagaagatggagaacaagaagaa
agcccacagccaggaaagggcggggccctagccagtgactatgactatctgatgtctatg
agaatcgattcattgactgaagaaaaagtgcaagagctttgtgcgcaaaaagaaaaacta
gaagccgaggtagatgagttaagaagaacatctcctcaaactctatggttgagggaactc
gatgcattagaagaggaactcgataaactcgatcagaaggaggctgaggcagagggagcg
aggaaggaaatgagaatgaatcacatcgccggggttgcaccttctaaacaagtagctaag
aagccaagaaaaaataccgcaaccaaattatctgttagtgctaccactactgatgcagga
ggtcagaagaaatccaagaaagctcccgctaaaaagcaaacggttgaagaaagtgacgaa
gatgaagaaatacttgcgctgaaagaccgacttgctgcctacaatcttgattcttcccct
gataatggagccatggaaactgacacagtggtatcagaccaaggaaaggcaaagaaacag
cccagcagaaatgctgctgcaaagaaggcaacttacgtcctctcgtctgatgaggacgat
gaacctgagcagcaacaacgcctcatgccgacaatcgaggaagccgacgacgtcgtcgag
gaggcatcagtgaaagcagttaaagggcgtaagcctaagaatgaaactggcaaggccacc
aggaagagaggtcccgcgcaggccagcaaggcgactactactagtcagaaggtcaggaaa
atgagggcctctcctttcaacaagaaaagtggatccgtgttgagtaaaccaaggaatgaa
gactcgagcagcggctcctcgtccaacgacgcgacagcggcagcagcaaggactcggccg
aagagagaaagcagaaccaaagctgctgtgtacgtggagagtgattcggaaggggaaacc
aacgaggtgggagatgatgatgatgatgcgactgaggattctgatttccaggatgaagat
taa
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