Zingiber officinale (ginger): 122005920
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Entry
122005920 CDS
T08725
Name
(RefSeq) autophagy-related protein 13a-like
KO
K08331
autophagy-related protein 13
Organism
zof
Zingiber officinale (ginger)
Pathway
zof04136
Autophagy - other
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09140 Cellular Processes
09141 Transport and catabolism
04136 Autophagy - other
122005920
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
zof04131
]
122005920
03029 Mitochondrial biogenesis [BR:
zof03029
]
122005920
Membrane trafficking [BR:
zof04131
]
Autophagy
Autophagosome formation proteins
ULK complex
122005920
Atg1 complex
122005920
Mitochondrial biogenesis [BR:
zof03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
122005920
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATG13
Motif
Other DBs
NCBI-GeneID:
122005920
NCBI-ProteinID:
XP_042417102
LinkDB
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Position
7B:66068148..66074931
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AA seq
582 aa
AA seq
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MASPSDTDRTEQIIIHFLHKTLHVVLASRIPHIRPAPRPSSGKRDRWFHLDLGDLPAPIA
HHGAFMDPLVIDILLTPRRDAAESEAGEAVVERWTAQCVPWPATSHHPHDVGSLQSRTYK
KSAILLRSLHSLLRILPSHRIFRMLCSSAQSYNYELGYRASSFAAPFSRAEEADLKKYSF
APVETLFGQLVVSVQYRPSLAAFHLEISSPIAPMIITNYIGSPAAERSRPFPSSLPNWTS
RPTTSQNPPKDFRPSAAAAPQFNRPHSWNVAPMAHHPLSSPQDRVCKLASSPPEHYGRLG
PNQRSLSDRKGNLNFDDFRLSPPFSTSTSSSPPTLGSHSLRSRLHMETAPMSIPVLETGK
NQTHRSPNLSDPFKSLLPPLSPRSTRPDPSSQESPSKSRSFRKSEGLSGGDIYLNLHMHT
AYKGLKDGRDDSGRFSALSSGGSPRYAFSRSSSRFSIQDDLDDTDFSYPFAVDDVDTSDS
HTRSPDVKDAEYSSSHKSQQAAVGNLVHMLKTAPPLRQDQSCSSQSSDLNGEISTSSSVL
SRKTSDALEELQTYQEMKNLILSKSGAGTKLQESLQEKRNKE
NT seq
1749 nt
NT seq
+upstream
nt +downstream
nt
atggcgtccccctccgataccgatcgcacggagcagatcatcatccacttcctccacaag
actctccacgtggtgctggcctcgcgcatcccccacatccgcccggcaccacgcccctcc
tccggaaagcgcgaccgctggttccacctcgacctcggtgacctcccggccccgatcgcg
caccatggcgccttcatggatccattggttatcgacatcctcctcaccccgcgccgcgac
gcagccgaatccgaagccggagaggctgtcgtggagcggtggaccgcccagtgcgtcccc
tggcccgccacttcgcaccacccccatgatgttggctccctccaatccaggacctacaag
aaatcagcgattctactcagatctctccattcgctgctccggatcctcccgtctcaccgg
atcttccggatgctttgctcctctgcccagtcttacaactacgagcttggctaccgggct
tcctcattcgcggcgccgttttctagggcggaagaggcggatttgaagaaatacagcttc
gccccagtggagaccctattcggccagttagtcgtttcggtgcagtaccgcccaagcctc
gctgctttccacctcgaaatctcctccccgattgcgccgatgatcataaccaattacatc
ggtagccctgcggctgagcgcagtaggcctttcccttcttcgctgcctaattggacatct
cgcccgaccacatctcagaatccacccaaggacttccggccatcggccgcggcagctcct
caattcaatcgcccgcacagctggaatgttgcgcccatggcgcatcacccgctcagttcg
ccgcaggatcgtgtttgcaagttagcatcctcgcctcctgagcattatggccgtctgggg
cctaaccagcggtcgctgagcgataggaaaggaaatttaaattttgatgattttcggctc
tccccgccgttctctacttcgacgtcctcttcgcctccgacactgggtagccattccctt
cgatccaggttacacatggagacggcaccaatgagcatacctgtgttagagacggggaag
aaccagacgcaccgcagtccaaacctttcggatcctttcaagagccttttaccaccacta
tctcctagaagtacaaggcctgatccttcaagccaggagtctccttccaagagcagatct
ttcagaaagtcagaaggtttgagtggaggcgatatctacttaaacttgcatatgcacact
gcatataagggtctcaaggatggtcgggatgattctggaagattctctgctttgtcttct
ggtggttcacctaggtatgccttttcaagaagctccagtcgtttctcaatccaggatgat
cttgacgatacagatttctcttacccatttgctgtggatgatgttgacacatcagattcc
catacgaggagccctgatgtcaaggatgcagagtattcttcctctcataaatcacaacag
gcagctgttggaaatcttgtccacatgttaaagaccgcgcctcctcttcgccaagatcag
agctgttcatcgcagtcttctgacctaaatggagaaattagcacgagcagttccgtcttg
tctaggaaaacaagtgatgctctggaggaactccagacgtaccaagagatgaagaacctt
attctttccaagagtggggctgggactaagttacaagaatctcttcaagaaaagagaaac
aaagagtga
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