Zingiber officinale (ginger): 122005925
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Entry
122005925 CDS
T08725
Name
(RefSeq) F-box protein At5g07670-like isoform X1
KO
K10268
F-box and leucine-rich repeat protein 2/20
Organism
zof
Zingiber officinale (ginger)
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
zof04121
]
122005925
Ubiquitin system [BR:
zof04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
122005925
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
DUF7885
LRR_4
F-box-like
LRR_R13L1-DRL21
LRR_RPS2
F-box_5
LRR_At5g56370
F-box
Motif
Other DBs
NCBI-GeneID:
122005925
NCBI-ProteinID:
XP_042417107
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All DBs
Position
7B:complement(66218618..66222609)
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AA seq
460 aa
AA seq
DB search
MRRRRRLRSWFAADKTVKHAVLEMQLDGQISTLKAPQVGDAPDPTAILSDEILLRVLAAL
PDSVRLSVSLVCRRWLRLAGRLRRSLTVLDWSFLHRRRLPLRFPNLDDLDLVPASFATPS
DADAGVVLSKGAVSFSVDAGADPPVGECRFLEPDVIDRGLVIVASDCPGLRKLSLVALAS
EVGVRAVAEACDILQELELHRCSDLALRPISAFKNLQILRIVGAVEGFYSGPGVADIGLT
MLAHGCKRLVKLELAGCEGSYDGISAVGQCCEMLEELTISNHRMDAGWIAALSFCENLKK
LRLQSCRRIDADPGPLEHLGRCPSIQTLQMEQCQLRDKRSLEALFRVCEAVREVMFENCW
GLDDDMFSLSSICRYVRSLSLEGCSLLTTKGFESVVLSWIDLKRLEVISCNNIKDDEVSP
TLTNLFSTLKEFKWRPDSKSVLAMGLSGTDMGKKGGRFFK
NT seq
1383 nt
NT seq
+upstream
nt +downstream
nt
atgcgccgccgccgccgcctgaggagctggttcgctgccgataagaccgtcaagcatgcg
gtgcttgagatgcagctcgatggccaaatctcgacgctgaaagctccccaggttggggac
gcgccagatcccaccgcgatcctctccgacgagatcctcctccgcgtcctcgccgcgctc
cctgactcagttcgcctgtctgtctccctcgtttgccggcgatggctacgcctcgccggc
cgcctccgccgctccctcaccgtactcgactggtccttccttcaccgtcgccgccttccc
cttcgctttcccaacctcgacgacctcgacctcgttcccgcctccttcgcgaccccttcg
gatgctgacgccggcgtcgttctctcgaagggcgccgtttccttctctgtcgatgccggc
gcagaccctcccgtgggcgagtgccgcttcctcgagccggatgtcatcgatcgtggtctc
gttattgttgccagcgactgccctggtcttcggaaattgtccctcgttgccctcgcttcg
gaggtcggtgtcagggcggtcgccgaagcgtgcgacattctgcaggaactggaactccat
cgctgctccgatctcgctctccgtcccatctccgctttcaagaacctccagatactgcgg
atagtgggagccgttgaggggttctactcaggtcccggtgtcgcggacattggactcaca
atgctggcccatggatgcaagcgactggtgaagctggagcttgctggttgtgagggtagc
tacgacggcatctcagcggtggggcagtgctgcgagatgcttgaggaattgacgatatca
aaccaccggatggatgcaggatggatagctgcattgtccttctgtgaaaacctgaagaaa
ttgagattgcagagctgcaggaggatagacgctgacccagggccattggaacacttagga
aggtgccccagcatccagacacttcaaatggagcagtgccagctgcgtgataaaagaagc
ttggaagcattgtttagggtgtgtgaggcagtaagagaagtcatgtttgaaaattgttgg
ggactggatgatgacatgtttagtctttccagcatttgcaggtacgtgaggtctctctcc
ttagagggctgctcactcttaaccacaaaaggttttgaatcagtagttttatcatggatc
gatttgaagagactcgaagtcatctcgtgcaataatataaaggacgacgaagtgtctcct
acgctaacaaatcttttctcaaccctcaaagagttcaagtggcgaccagactccaaatca
gtccttgcgatgggcctctcagggacggacatgggcaaaaagggtggaagattctttaag
tag
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