Zingiber officinale (ginger): 122006029
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Entry
122006029 CDS
T08725
Name
(RefSeq) plant-specific TFIIB-related protein 1-like
KO
K03124
transcription initiation factor TFIIB
Organism
zof
Zingiber officinale (ginger)
Pathway
zof03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
122006029
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
zof03021
]
122006029
Transcription machinery [BR:
zof03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
122006029
Prokaryotic type
Archaeal type
TFB
122006029
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TFIIB
Cyclin_C
HTH_Mga
Motif
Other DBs
NCBI-GeneID:
122006029
NCBI-ProteinID:
XP_042417261
LinkDB
All DBs
Position
7B:complement(74529740..74534014)
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AA seq
542 aa
AA seq
DB search
MGRVRCPYCQGTAGRSATTPYGRCVTECCSCGRVVEERQVYTHQLFPLRAFDYPLPLVTP
DLPLPPPSAAVEATNEDDEDPFHPTGFVTTFSTLSLEPCPLFARSATSFAGHLAELERAL
DSSSSSSSSSVSDGSGGPLVSVDHLRAYLQILEVSSILRLEHDIADHAFQLFRDCSSTTC
LRNRSIEALATAALVHAIREAQEPRTLQEISSASNLPQKEIGKYIKILGEALKLSQPINS
NSIAVHMPRFCTLLQLNKSAQQLAAHIGEVVVNKCFCTRRNPISISAAAIYLACQLEDKR
KTQAEICKVTGLTEVTLRKVYKELLENWDDLMPPNYTPAVPPEKAFPMTTITSGRSSANK
DMVDAYHSSAHHDKDKHSEAIEASKTSLEFSHTVKVNNEAEKKSSSHVRNLTSFDPQDLN
QGSFSMPQVPFGMFQCKPQREDIKGEQGIINLNETEPNLSENKKASKDLRMGDTSGWADQ
TSTPSSSKRYTSSWHLNPAPAVPESYVQLANRQLGLQFVPGTGESAKGGNDDAASRSHKP
EN
NT seq
1629 nt
NT seq
+upstream
nt +downstream
nt
atggggcgcgtgcgctgcccttactgccagggcaccgccggccggagcgccactacgccc
tacggccgctgcgtcaccgagtgctgttcctgcggacgagtggtggaggagcggcaggtt
tacacccaccagctcttccccctccgcgccttcgactaccccctgccccttgtcacccct
gaccttcccttgccgcccccttccgccgctgtcgaagccaccaacgaggatgatgaggac
cccttccacccaaccggattcgtgaccacgttctccaccctgtccctcgagccctgccct
ctcttcgcccgctctgctacctctttcgccggacaccttgcggagctggagcgtgcccta
gattcttcctcttcttcgtcttcttcttccgtctctgatggatcgggagggccgctcgtc
tccgtagaccacctccgggcgtacctccagatcttggaggtatcgtccatccttaggcta
gagcatgacatagctgaccacgccttccagctcttccgtgactgctcttctaccacttgc
ctccgaaaccgtagcatcgaggccctggcgacggctgcgcttgtgcatgccatccgtgag
gcacaggaacctcggaccctacaggaaatatcttctgctagcaatcttcctcaaaaggag
atcggaaagtacatcaagatcctaggggaggctctgaaacttagccaacccatcaacagc
aattctatcgcagtccacatgcctaggttttgtacacttctccaactaaataaatcagct
cagcaacttgcagctcatattggagaagttgttgtgaacaaatgcttttgtactcgtcgg
aacccaataagcatctcagctgctgctatctatttagcatgtcaactagaagataaacgt
aaaactcaggctgagatttgtaaggtgactggtttaacagaggttacccttcggaaggtg
tacaaagagcttttggagaattgggatgatttgatgcctcctaattacactcctgcagtg
ccccctgagaaagctttcccaatgactacaatcacctctggtcgatcttcagccaacaaa
gatatggttgatgcttaccattcgagtgcacatcacgacaaagataaacactcagaagct
attgaagcaagtaaaacttctctcgagtttagtcatacagtcaaagtgaataacgaggca
gagaagaaaagcagttcccatgtccgcaatcttacatctttcgatccccaggatttgaat
cagggatcattctccatgccacaggttccatttggtatgttccagtgcaaaccgcagaga
gaggacataaagggtgaacaaggcatcatcaatcttaatgaaactgaacccaatctgtca
gagaataagaaggccagcaaggacttgaggatgggtgatacttctggatgggcagatcaa
acttcaactccctcatcgtcaaaaagatacacaagttcatggcatttgaatcctgcaccg
gctgtcccagaatcttacgttcagttggcaaatcgacagttgggtcttcaatttgttcct
ggaactggcgagagtgcaaaaggtggaaatgatgatgctgcgagtcggagccacaagcca
gagaattaa
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integrated database retrieval system
